RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PPP1R3DO95685 299 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 ALDOAP04075 364 aaKnown RBP4.68□□□□□ -1.66
SMC4-219ENST00000487747 CYP3A4P08684 503 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 TNFSF8P32971 234 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 RPL36AP83881 106 aaKnown RBP4.68□□□□□ -1.66
SMC4-219ENST00000487747 TLE3Q04726 772 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 FNBP1LQ5T0N5 605 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 DCAF12L2Q5VW00 463 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 TRABD2AQ86V40 505 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 CADM3Q8N126 398 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 SLC25A41Q8N5S1 370 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 TMEM217Q8N7C4 229 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 IPO4Q8TEX9 1081 aaKnown RBP4.68□□□□□ -1.66
SMC4-219ENST00000487747 SARGQ9BW04 601 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 IGSF9Q9P2J2 1179 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 CA14Q9ULX7 337 aa4.68□□□□□ -1.66
SMC4-219ENST00000487747 CYP3A7-CYP3A51PA0A087WV96 503 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 TRBV5-7A0A0A0MS05 114 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 KIF28PB7ZC32 967 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 CYP3A7P24462 503 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 ADPRHP54922 357 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 ALG10Q5BKT4 473 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 ALG10BQ5I7T1 473 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.67□□□□□ -1.664e-23■■■■■ 72.8
SMC4-219ENST00000487747 Q6ZSV7 163 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 ZNF329Q86UD4 541 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 FAM217AQ8IXS0 508 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 CMASQ8NFW8 434 aaPredicted RBP4.67□□□□□ -1.66
SMC4-219ENST00000487747 BRI3BPQ8WY22 251 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 RIPOR3Q96MK2 946 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 NECTIN3Q9NQS3 549 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 MAGED2Q9UNF1 606 aaPredicted RBP4.67□□□□□ -1.66
SMC4-219ENST00000487747 ZBTB1Q9Y2K1 713 aa4.67□□□□□ -1.66
SMC4-219ENST00000487747 MCIDASD6RGH6 385 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 GAS8-AS1O95177 125 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 IGKV3-20P01619 116 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 HOXD3P31249 432 aaPredicted RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 GRK5P34947 590 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 COMPP49747 757 aaPredicted RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 GAS1P54826 345 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 SAFBQ15424 915 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMC4-219ENST00000487747 SHBQ15464 509 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 IZUMO4Q1ZYL8 232 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 MPEG1Q2M385 716 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 C9orf50Q5SZB4 431 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 ARMC9Q7Z3E5 817 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 CCDC25Q86WR0 208 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 FAM110DQ8TAY7 271 aaPredicted RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 REXO5Q96IC2 774 aaKnown RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 SORBS1Q9BX66 1292 aaKnown RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 TM6SF1Q9BZW5 370 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 B3GNT4Q9C0J1 378 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 CCDC134Q9H6E4 229 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 C6orf106Q9H6K1 298 aaPredicted RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 DTX4Q9Y2E6 619 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 PCDHGB2Q9Y5G2 931 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 PCDHGB1Q9Y5G3 927 aa4.66□□□□□ -1.66
SMC4-219ENST00000487747 COPG1Q9Y678 874 aaKnown RBP4.66□□□□□ -1.66
SMC4-219ENST00000487747 TCRBV7S3A2A0A539 114 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 C3orf70A6NLC5 250 aaPredicted RBP4.65□□□□□ -1.67
SMC4-219ENST00000487747 PIP5K1BO14986 540 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 GRID2O43424 1007 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 DDNO94850 711 aaPredicted RBP4.65□□□□□ -1.67
SMC4-219ENST00000487747 CHRNB2P17787 502 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 AKT1P31749 480 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 SLC16A2P36021 539 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 HSPA7P48741 367 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 CLCN5P51795 746 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 RHAGQ02094 409 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 HNF4GQ14541 408 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 DUSP6Q16828 381 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 RINT1Q6NUQ1 792 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 TMEM71Q6P5X7 295 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 TMEM88Q6PEY1 159 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 ZNF367Q7RTV3 350 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 APOLD1Q96LR9 279 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 ZNF556Q9HAH1 456 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 FZD10Q9ULW2 581 aa4.65□□□□□ -1.67
SMC4-219ENST00000487747 A0A1B0GUV1 79 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 ZNF432O94892 652 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 CAMTA2O94983 1202 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 ZBTB11O95625 1053 aaPredicted RBP4.64□□□□□ -1.67
SMC4-219ENST00000487747 GLP2RO95838 553 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 LCKP06239 509 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 PKMP14618 531 aaKnown RBP4.64□□□□□ -1.67
SMC4-219ENST00000487747 ITGB8P26012 769 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 KLRC2P26717 231 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 CHRNA5P30532 468 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 KCNJ4P48050 445 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 ART1P52961 327 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 KIF5AQ12840 1032 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 KIAA1324Q6UXG2 1013 aaKnown RBP4.64□□□□□ -1.67
SMC4-219ENST00000487747 C16orf82Q7Z2V1 217 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 TMPRSS12Q86WS5 348 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 KLBQ86Z14 1044 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 LRRC57Q8N9N7 239 aa4.64□□□□□ -1.67
SMC4-219ENST00000487747 PARD3BQ8TEW8 1205 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms