RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PCDHGA12O60330 932 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 DKK1O94907 266 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 ERBB2P04626 1255 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 WNT1P04628 370 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 SLC2A3P11169 496 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 PDGFRAP16234 1089 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 GOT1P17174 413 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 ABCB4P21439 1286 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 CCR1P32246 355 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 CLCN1P35523 988 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 PSMD8P48556 350 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 RACK1P63244 317 aaKnown RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 IL9RQ01113 521 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 OR6B2Q6IFH4 312 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 CXorf57Q6NSI4 855 aaKnown RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
VPS16-208ENST00000487461 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 OR52K2Q8NGK3 314 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 RNF34Q969K3 372 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 ALG14Q96F25 216 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 DNAJC12Q9UKB3 198 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
VPS16-208ENST00000487461 SPEGQ15772 3267 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 BAHCC1Q9P281 2608 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 TCAF2A6NFQ2 919 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 PLK4O00444 970 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 HSF2BPO75031 334 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 IL1BP01584 269 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 PNMA6AP0CW24 399 aaPredicted RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 C5AR1P21730 350 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 NNMTP40261 264 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 MTIF2P46199 727 aaKnown RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 IRAK1P51617 712 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 CCR5P51681 352 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 C21orf59P57076 290 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 UBE2HP62256 183 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 PTK2Q05397 1052 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 SULT2A1Q06520 285 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 NME3Q13232 169 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 AUHQ13825 339 aaKnown RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 DPY19L2P1Q6NXN4 242 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 OLFML1Q6UWY5 402 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS16-208ENST00000487461 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 C1orf131Q8NDD1 294 aaKnown RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 OR14C36Q8NHC7 312 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 ACE2Q9BYF1 805 aaPredicted RBP12.57□□□□□ -0.4
VPS16-208ENST00000487461 OR51B4Q9Y5P0 310 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 HS3ST4Q9Y661 456 aa12.57□□□□□ -0.4
VPS16-208ENST00000487461 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 A0A1W2PR77 199 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 TNFSF14O43557 240 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 PAGE1O75459 146 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 ADH1BP00325 375 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 DRD3P35462 400 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 KRT9P35527 623 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 GRK6P43250 576 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
VPS16-208ENST00000487461 CCT8P50990 548 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 METAP1P53582 386 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 ADPRHP54922 357 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 OXCT1P55809 520 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 CENPCQ03188 943 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 ELAVL3Q14576 367 aaKnown RBP12.56□□□□□ -0.4
VPS16-208ENST00000487461 SHBQ15464 509 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 RABGAP1LQ5R372 815 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 TTC39BQ5VTQ0 682 aaPredicted RBP12.56□□□□□ -0.4
VPS16-208ENST00000487461 PROSER1Q86XN7 944 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 RPRD1AQ96P16 312 aaPredicted RBP12.56□□□□□ -0.4
VPS16-208ENST00000487461 PLCB1Q9NQ66 1216 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 AASDHPPTQ9NRN7 309 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 SARDHQ9UL12 918 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 VANGL2Q9ULK5 521 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 DMXL2Q8TDJ6 3036 aa12.56□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3DA0A087WVF3 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3IA0A087WXS9 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3EA0A087X179 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3KA0A087X1G2 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3FA6NER0 549 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3LB9A6J9 549 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms