RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MYL1P05976 194 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 ZSCAN22P10073 491 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-228ENST00000487354 DNM1Q05193 864 aaKnown RBP15.88■□□□□ 0.13
MCF2L-228ENST00000487354 KCNH2Q12809 1159 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 DCAF6Q58WW2 860 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 LCLAT1Q6UWP7 414 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 UNC45BQ8IWX7 931 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 OXR1Q8N573 874 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 DQX1Q8TE96 717 aaKnown RBP15.88■□□□□ 0.13
MCF2L-228ENST00000487354 FRS2Q8WU20 508 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 IRGQQ8WZA9 623 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 RPL10LQ96L21 214 aaKnown RBP15.88■□□□□ 0.13
MCF2L-228ENST00000487354 HESX1Q9UBX0 185 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 SARDHQ9UL12 918 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 LY6G6EA0A0G2JKS1 128 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 CAPN9O14815 690 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 PLRG1O43660 514 aaKnown RBP15.87■□□□□ 0.13
MCF2L-228ENST00000487354 MT-CO3P00414 261 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 CALCAP01258 141 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 VDRP11473 427 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 CD19P15391 556 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 NUMBP49757 651 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 ECT2LQ008S8 904 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 SFSWAPQ12872 951 aaKnown RBP15.87■□□□□ 0.13
MCF2L-228ENST00000487354 CDH18Q13634 790 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 EDRF1Q3B7T1 1238 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 AGBL4Q5VU57 503 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 IQCHQ86VS3 1027 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 CPNE5Q9HCH3 593 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 UCKL1Q9NWZ5 548 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 TPX2Q9ULW0 747 aaKnown RBP15.87■□□□□ 0.13
MCF2L-228ENST00000487354 U3KQA8 63 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 BSNQ9UPA5 3926 aa15.87■□□□□ 0.13
MCF2L-228ENST00000487354 PIEZO2Q9H5I5 2752 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 FAM237AA0A1B0GTK4 181 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 DXOO77932 396 aaKnown RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 IL1BP01584 269 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 RPL13P26373 211 aaKnown RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 MAT2AP31153 395 aaKnown RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 ZNF211Q13398 564 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 ELAVL3Q14576 367 aaKnown RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 SLC45A4Q5BKX6 768 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-228ENST00000487354 TRIM69Q86WT6 500 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 TMEM145Q8NBT3 493 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 TTC9Q92623 222 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 USP25Q9UHP3 1055 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 TLR6Q9Y2C9 796 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3DA0A087WVF3 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3IA0A087WXS9 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3EA0A087X179 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3KA0A087X1G2 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 A0A1W2PNU3 283 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3FA6NER0 549 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3LB9A6J9 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 RNF225M0QZC1 329 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 MPOP05164 745 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3HP0C7X1 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 CMA1P23946 247 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 RPL34P49207 117 aaKnown RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 PCBP4P57723 403 aaKnown RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TAS2R38P59533 333 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 NNTQ13423 1086 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 ATL3Q6DD88 541 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3GQ6DHY5 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3CQ6IPX1 549 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TAC4Q86UU9 113 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 TBC1D3Q8IZP1 549 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 ZNF248Q8NDW4 579 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 OR4C6Q8NH72 309 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 SNRNP27Q8WVK2 155 aaKnown RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 WBP1Q96G27 269 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 NAF1Q96HR8 494 aaKnown RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 ZNF578Q96N58 590 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-228ENST00000487354 LGMNQ99538 433 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 ASCL3Q9NQ33 180 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 NAALADL1Q9UQQ1 740 aa15.85■□□□□ 0.13
MCF2L-228ENST00000487354 BOD1L1Q8NFC6 3051 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 A0A1B0GVM2 712 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 PYCARD-AS1I3L0S3 204 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 SLC7A4O43246 635 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 MOCS2O96007 188 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-228ENST00000487354 IGLV3-25P01717 112 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 DGKAP23743 735 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 NDUFA8P51970 172 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 CNTN1Q12860 1018 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 OVGP1Q12889 678 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 SYPL2Q5VXT5 272 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 RAP1GAP2Q684P5 730 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 CIR1Q86X95 450 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-228ENST00000487354 LGI2Q8N0V4 545 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 KAT5Q92993 513 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 SERPINB11Q96P15 392 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 SPAG5Q96R06 1193 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 PRMT1Q99873 361 aaKnown RBP15.84■□□□□ 0.13
MCF2L-228ENST00000487354 KDM4CQ9H3R0 1056 aa15.84■□□□□ 0.13
MCF2L-228ENST00000487354 DMTF1Q9Y222 760 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms