RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TAC4Q86UU9 113 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 SPATS2Q86XZ4 545 aaKnown RBP20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 LGI2Q8N0V4 545 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 OXR1Q8N573 874 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 KAT5Q92993 513 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
SMPDL3A-202ENST00000487215 NYNRINQ9P2P1 1898 aaKnown RBP20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3DA0A087WVF3 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3IA0A087WXS9 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3EA0A087X179 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3KA0A087X1G2 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3FA6NER0 549 aaPredicted RBP20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3LB9A6J9 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TK2O00142 265 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 RRP8O43159 456 aaKnown RBP20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3HP0C7X1 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 VAV1P15498 845 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 METAP1P53582 386 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 ILKQ13418 452 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 PNOCQ13519 176 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 RAP1GAP2Q684P5 730 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3GQ6DHY5 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3CQ6IPX1 549 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TBC1D3Q8IZP1 549 aaPredicted RBP20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 MFSD2AQ8NA29 543 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 SNIP1Q8TAD8 396 aaKnown RBP20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 FAM149B1Q96BN6 582 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 NT5C1BQ96P26 610 aa20.09■□□□□ 0.81
SMPDL3A-202ENST00000487215 TRIM49BA6NDI0 452 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 CKMT2P17540 419 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 FMO5P49326 533 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 NUMBP49757 651 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 COBLL1Q53SF7 1204 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 SYPL2Q5VXT5 272 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 CHSY1Q86X52 802 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 PPM1KQ8N3J5 372 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 BAP1Q92560 729 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 FAM131CQ96AQ9 280 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 FCRL3Q96P31 734 aaPredicted RBP20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 RMND1Q9NWS8 449 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 ARHGAP20Q9P2F6 1191 aa20.08■□□□□ 0.81
SMPDL3A-202ENST00000487215 ASXL3Q9C0F0 2248 aa20.08■□□□□ 0.8
SMPDL3A-202ENST00000487215 APOEP02649 317 aa20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 TACR2P21452 398 aa20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 RPL34P49207 117 aaKnown RBP20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 ZNF658Q5TYW1 1059 aaPredicted RBP20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 PRPF39Q86UA1 669 aaKnown RBP20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 RFFLQ8WZ73 363 aa20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 TJP2Q9UDY2 1190 aa20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 CYTH4Q9UIA0 394 aa20.07■□□□□ 0.8
SMPDL3A-202ENST00000487215 SART1O43290 800 aaKnown RBP20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 BRINP1O60477 761 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 RTN2O75298 545 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 GLDCP23378 1020 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 MAT2AP31153 395 aaKnown RBP20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 NNMTP40261 264 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 INSM1Q01101 510 aaPredicted RBP20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 PROX2Q3B8N5 592 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 ZC3H12AQ5D1E8 599 aaKnown RBP20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 BEND5Q7L4P6 421 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 IQCHQ86VS3 1027 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 FRS2Q8WU20 508 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 CCDC34Q96HJ3 373 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 SPAG5Q96R06 1193 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 SCAND2PQ9GZW5 306 aaPredicted RBP20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 KDM4CQ9H3R0 1056 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 ST7Q9NRC1 585 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 CLCA2Q9UQC9 943 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 DMTF1Q9Y222 760 aa20.06■□□□□ 0.8
SMPDL3A-202ENST00000487215 CAPN9O14815 690 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 PMM2O15305 246 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 SLC7A4O43246 635 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 PLRG1O43660 514 aaKnown RBP20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 SDC3O75056 442 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 PDGFRAP16234 1089 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 ACP1P24666 158 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 GPD2P43304 727 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 NUCB2P80303 420 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 SLC12A1Q13621 1099 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 RRAGAQ7L523 313 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 CIR1Q86X95 450 aaPredicted RBP20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 CACTIN-AS1Q8N1I8 211 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 DCBLD1Q8N8Z6 715 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 LSM14AQ8ND56 463 aaKnown RBP20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 LMO3Q8TAP4 145 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 FGF11Q92914 225 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 BTN2A3PQ96KV6 586 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 METTL14Q9HCE5 456 aaKnown RBP20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 SARDHQ9UL12 918 aa20.05■□□□□ 0.8
SMPDL3A-202ENST00000487215 KNTC1P50748 2209 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 HELZ2Q9BYK8 2649 aaKnown RBP20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 F5H5T6 163 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 MAGEC1O60732 1142 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 IGLV3-25P01717 112 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 NUDT1P36639 197 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 SULT2A1Q06520 285 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 OVGP1Q12889 678 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 TRIM69Q86WT6 500 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms