RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 RNF169Q8NCN4 708 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 DEFB129Q9H1M3 183 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 ZDHHC2Q9UIJ5 367 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF180Q9UJW8 692 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 AKT3Q9Y243 479 aa12.66□□□□□ -0.38
HSPG2-211ENST00000486901 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KCNU1A8MYU2 1149 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF195O14628 629 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 FBXO21O94952 628 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 CDK4P11802 303 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 MTTPP55157 894 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ADARP55265 1226 aaKnown RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ANKDD1AQ495B1 522 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF618Q5T7W0 954 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 DUS1LQ6P1R4 473 aaKnown RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 AAGABQ6PD74 315 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 BNC2Q6ZN30 1099 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 APLFQ8IW19 511 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 MIPOL1Q8TD10 442 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 P2RY11Q96G91 374 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 CSPG4P5Q96PW8 444 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 EFR3BQ9Y2G0 817 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 A0A0J9YVX5 310 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 NRP1O14786 923 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 PFKMP08237 780 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 CDH5P33151 784 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 BACE1P56817 501 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 POU5F1BQ06416 359 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 PPIDQ08752 370 aaKnown RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 TAZQ16635 292 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KYQ8NBH2 561 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ARNTL2Q8WYA1 636 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 PRDM12Q9H4Q4 367 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 WDR41Q9HAD4 459 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 NDC80O14777 642 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 PLA2G6O60733 806 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 C2P06681 752 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 L1CAMP32004 1257 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 TBCBQ99426 244 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 CDH19Q9H159 772 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 COQ10BQ9H8M1 238 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 MOCS1Q9NZB8 636 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 KLK14Q9P0G3 267 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 ITGA11Q9UKX5 1188 aa12.65□□□□□ -0.38
HSPG2-211ENST00000486901 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-211ENST00000486901 FARP2O94887 1054 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 MX2P20592 715 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 MAGEA10P43363 369 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 GRIA4P48058 902 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 HPCAP84074 193 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CYLC2Q14093 348 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 ARCQ7LC44 396 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 OR9I1Q8NGQ6 314 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 FNIP1Q8TF40 1166 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 EXT2Q93063 718 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 SLC29A1Q99808 456 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 C1orf21Q9H246 121 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 SOX17Q9H6I2 414 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 C7orf72A4D263 438 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 PDLIM1O00151 329 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 BIRC5O15392 142 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CTBP1Q13363 440 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 DGKDQ16760 1214 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 KRT80Q6KB66 452 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CDKL3Q8IVW4 592 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CELF6Q96J87 481 aaKnown RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 LHX5Q9H2C1 402 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 PIF1Q9H611 641 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 NOL11Q9H8H0 719 aaKnown RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 PNPLA8Q9NP80 782 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 AURKCQ9UQB9 309 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 FAM58BPP0C7Q3 252 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 NDUFV1P49821 464 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-211ENST00000486901 CERS2Q96G23 380 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 GMLQ99445 158 aa12.64□□□□□ -0.39
HSPG2-211ENST00000486901 TMEM79Q9BSE2 394 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms