RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 FBXO4Q9UKT5 387 aa4.37□□□□□ -1.71
GCFC2-209ENST00000486016 TNFSF13BQ9Y275 285 aa4.37□□□□□ -1.71
GCFC2-209ENST00000486016 DTX4Q9Y2E6 619 aa4.37□□□□□ -1.71
GCFC2-209ENST00000486016 SCN5AQ14524 2016 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 DOCK7Q96N67 2140 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 APAF1O14727 1248 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 MSI1O43347 362 aaKnown RBP4.36□□□□□ -1.71
GCFC2-209ENST00000486016 ALDOAP04075 364 aaKnown RBP4.36□□□□□ -1.71
GCFC2-209ENST00000486016 EEF1GP26641 437 aaKnown RBP4.36□□□□□ -1.71
GCFC2-209ENST00000486016 TM4SF4P48230 202 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 IFIT5Q13325 482 aaKnown RBP4.36□□□□□ -1.71
GCFC2-209ENST00000486016 GALNT3Q14435 633 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 DCAF12L2Q5VW00 463 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 DPP9Q86TI2 863 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 WDR75Q8IWA0 830 aaKnown RBP4.36□□□□□ -1.71
GCFC2-209ENST00000486016 SLC12A4Q9UP95 1085 aa4.36□□□□□ -1.71
GCFC2-209ENST00000486016 MCIDASD6RGH6 385 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 PMM2O15305 246 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 RPP40O75818 363 aaKnown RBP4.35□□□□□ -1.71
GCFC2-209ENST00000486016 TNFSF4P23510 183 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 SLC16A2P36021 539 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 KCNJ4P48050 445 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ART1P52961 327 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ZP1P60852 638 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 RHAGQ02094 409 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ZBTB16Q05516 673 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 PKP1Q13835 747 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 GPR18Q14330 331 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 COBLL1Q53SF7 1204 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 FNBP1LQ5T0N5 605 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ARL6IP4Q66PJ3 421 aaKnown RBP4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ANKRD40Q6AI12 368 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ERAP2Q6P179 960 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 GSG1LQ6UXU4 331 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 Q6ZSV7 163 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 ARMC9Q7Z3E5 817 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 NR2C2APQ86WQ0 139 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 CADM3Q8N126 398 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 C6orf106Q9H6K1 298 aaPredicted RBP4.35□□□□□ -1.71
GCFC2-209ENST00000486016 TM7SF3Q9NS93 570 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 FAM50BQ9Y247 325 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 RAI2Q9Y5P3 530 aa4.35□□□□□ -1.71
GCFC2-209ENST00000486016 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 HNRNPDLO14979 420 aaKnown RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 GAS8-AS1O95177 125 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 GLUD1P00367 558 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 PKMP14618 531 aaKnown RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 CHRNB2P17787 502 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 TNFSF8P32971 234 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 GLUD2P49448 558 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 PMS2P54278 862 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 ALG10Q5BKT4 473 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 ALG10BQ5I7T1 473 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 PRAMEF19Q5SWL8 479 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 C16orf82Q7Z2V1 217 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 FMNL3Q8IVF7 1028 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 CLEC4CQ8WTT0 213 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 ZNF566Q969W8 418 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 ZNF419Q96HQ0 510 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 POLDIP3Q9BY77 421 aaKnown RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 TM6SF1Q9BZW5 370 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 B3GNT4Q9C0J1 378 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 IGSF9Q9P2J2 1179 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 RAB21Q9UL25 225 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 TRPC5Q9UL62 973 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 FZD10Q9ULW2 581 aa4.34□□□□□ -1.71
GCFC2-209ENST00000486016 MAGED2Q9UNF1 606 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 COPG1Q9Y678 874 aaKnown RBP4.34□□□□□ -1.71
GCFC2-209ENST00000486016 LOC105371045A0A1W2PR82 267 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 SRRM3A6NNA2 597 aaPredicted RBP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 PLA2G6O60733 806 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 TRIM27P14373 513 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 NPPBP16860 134 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 ZNF12P17014 697 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 KLRK1P26718 216 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 RBM6P78332 1123 aaKnown RBP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 SAFBQ15424 915 aaKnown RBP eCLIP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 MPEG1Q2M385 716 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 KRTAP24-1Q3LI83 254 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 DNTTIP2Q5QJE6 756 aaKnown RBP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 GFI1BQ5VTD9 330 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 C9orf57Q5W0N0 161 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 ZNF367Q7RTV3 350 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 ZNF329Q86UD4 541 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 FAM110DQ8TAY7 271 aaPredicted RBP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 C18orf8Q96DM3 657 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 REXO5Q96IC2 774 aaKnown RBP4.33□□□□□ -1.72
GCFC2-209ENST00000486016 MECRQ9BV79 373 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 CDT1Q9H211 546 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 PLSCR4Q9NRQ2 329 aa4.33□□□□□ -1.72
GCFC2-209ENST00000486016 SERINC4A6NH21 518 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 BTBD18B2RXH4 712 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 RASA4BC9J798 803 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 RASA4O43374 803 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 DDNO94850 711 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 PLGP00747 810 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 GNLYP22749 145 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms