RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 TRIM56Q9BRZ2 755 aaKnown RBP19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 FAM129AQ9BZQ8 928 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 ZBP1Q9H171 429 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 NT5MQ9NPB1 228 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 TLR9Q9NR96 1032 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 ZC3H7BQ9UGR2 993 aaKnown RBP19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 CPQQ9Y646 472 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 LAMA3Q16787 3333 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 TP73O15350 636 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 HMGA1P17096 107 aaKnown RBP19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 NR1D1P20393 614 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 IRS1P35568 1242 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 MSANTD2Q6P1R3 559 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 VSIG1Q86XK7 387 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 ANKRD42Q8N9B4 389 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 PAIP2Q9BPZ3 127 aaKnown RBP19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 SH3BP1Q9Y3L3 701 aa19.03■□□□□ 0.64
NECTIN3-206ENST00000485303 A0A087WUV0 522 aaPredicted RBP19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 NCAM2O15394 837 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 OPHN1O60890 802 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 TPH1P17752 444 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 PTPN3P26045 913 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 SF3A3Q12874 501 aaKnown RBP eCLIP19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 CES3Q6UWW8 571 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 CCDC149Q6ZUS6 474 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 ARNTL2Q8WYA1 636 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 CDK5RAP1Q96SZ6 601 aaKnown RBP19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 ASAH2Q9NR71 780 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 HCFC1R1Q9NWW0 138 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 SAMD15Q9P1V8 674 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 ERICH4A6NGS2 130 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 GRM6O15303 877 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 IGLV3-25P01717 112 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 ZBTB17Q13105 803 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 SEMA3BQ13214 749 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 POLD3Q15054 466 aaPredicted RBP19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 TPGS1Q6ZTW0 290 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 BEND5Q7L4P6 421 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 BNIPLQ7Z465 357 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 CARNMT1Q8N4J0 409 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 RTL3Q8N8U3 475 aaKnown RBP19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.64
NECTIN3-206ENST00000485303 TANC1Q9C0D5 1861 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 CCNB1P14635 433 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 KPNA1P52294 538 aaPredicted RBP19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 ITPRIPL1Q6GPH6 555 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 HMCESQ96FZ2 354 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 MUC3BQ9H195 1237 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 TMBIM4Q9HC24 238 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 MLXIPLQ9NP71 852 aa19.02■□□□□ 0.63
NECTIN3-206ENST00000485303 TYW5A2RUC4 315 aaKnown RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 LINC01553A4QN01 128 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 ZNF487B1APH4 448 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 BHMG1C9JSJ3 638 aaPredicted RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 ACSL4O60488 711 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 CAPN2P17655 700 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 IFI35P80217 286 aaPredicted RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 SRRM1Q8IYB3 904 aaKnown RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 PPM1NQ8N819 430 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 SPATA22Q8NHS9 363 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 TTC25Q96NG3 672 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 OLFM3Q96PB7 478 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 IGFLR1Q9H665 355 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 ZFP37Q9Y6Q3 630 aaPredicted RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 STXBP5Q5T5C0 1151 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 CCDC117Q8IWD4 279 aaPredicted RBP19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 FBF1Q8TES7 1133 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 TSC2P49815 1807 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 C5orf60A6NFR6 353 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 BNIP3LO60238 219 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 HCAR3P49019 387 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 CREMQ03060 361 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 WASHC5Q12768 1159 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 TCEAL8Q8IYN2 117 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 FSD1LQ9BXM9 530 aa19.01■□□□□ 0.63
NECTIN3-206ENST00000485303 TTC24A2A3L6 582 aaPredicted RBP19■□□□□ 0.63
NECTIN3-206ENST00000485303 RASA4BC9J798 803 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 CHADO15335 359 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 RASA4O43374 803 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 GCATO75600 419 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 FDFT1P37268 417 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 ZNF135P52742 658 aaPredicted RBP19■□□□□ 0.63
NECTIN3-206ENST00000485303 EFTUD2Q15029 972 aaKnown RBP eCLIP19■□□□□ 0.631e-5■■■□□ 15.7
NECTIN3-206ENST00000485303 PABPC1LQ4VXU2 614 aaKnown RBP19■□□□□ 0.63
NECTIN3-206ENST00000485303 C6orf118Q5T5N4 469 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 RNF135Q8IUD6 432 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 OR52K1Q8NGK4 314 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 ING5Q8WYH8 240 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 SLC39A13Q96H72 371 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 FARP1Q9Y4F1 1045 aaPredicted RBP19■□□□□ 0.63
NECTIN3-206ENST00000485303 H0Y626 953 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 SLC4A1P02730 911 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 MGAT1P26572 445 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 SEPT6Q14141 434 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 RNF168Q8IYW5 571 aaPredicted RBP19■□□□□ 0.63
NECTIN3-206ENST00000485303 SLC25A41Q8N5S1 370 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 LZTR1Q8N653 840 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 OR7D4Q8NG98 312 aa19■□□□□ 0.63
NECTIN3-206ENST00000485303 MAN1C1Q9NR34 630 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms