RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FRS2Q8WU20 508 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 ALG14Q96F25 216 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 OMDQ99983 421 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 FAM204AQ9H8W3 233 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 PTPRBP23467 1997 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 H0Y8X5 98 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 SLC7A4O43246 635 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 TNFSF14O43557 240 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 DAB1O75553 588 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 MZF1P28698 734 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 NOS2P35228 1153 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 C21orf59P57076 290 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 ELAVL3Q14576 367 aaKnown RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 INAVAQ3KP66 663 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 KCNT1Q5JUK3 1230 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 FBXL22Q6P050 247 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 ZDHHC17Q8IUH5 632 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 AADATQ8N5Z0 425 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 PNPLA1Q8N8W4 532 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 ACE2Q9BYF1 805 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 DDIT4Q9NX09 232 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 BTBD3Q9Y2F9 522 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 A0A1W2PR77 199 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 ATP9BO43861 1147 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 RNASEH2AO75792 299 aaKnown RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 PDGFRAP16234 1089 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 CLCN1P35523 988 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 NUDT1P36639 197 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 USP8P40818 1118 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 BPIFB4P59827 614 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 SLC6A3Q01959 620 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 SCAPQ12770 1279 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 AUHQ13825 339 aaKnown RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 FAM183BPQ6ZVS7 135 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 ADAT2Q7Z6V5 191 aaKnown RBP11.81□□□□□ -0.52
SCFD1-206ENST00000484733 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 DNAJC12Q9UKB3 198 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 CEP83Q9Y592 693 aa11.81□□□□□ -0.52
SCFD1-206ENST00000484733 TAF4O00268 1085 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ALOX15BO15296 676 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 YKT6O15498 198 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ATXN1LP0C7T5 689 aaKnown RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 SCNN1AP37088 669 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 MTIF2P46199 727 aaKnown RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 PSMD8P48556 350 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 FAM114A1Q8IWE2 563 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 C1orf131Q8NDD1 294 aaKnown RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 RNF34Q969K3 372 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 PGAP3Q96FM1 320 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 RPL10LQ96L21 214 aaKnown RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 DKK4Q9UBT3 224 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 TBC1D30Q9Y2I9 924 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 OR51B4Q9Y5P0 310 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 TP53BP1Q12888 1972 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 LATO43561 262 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 CLDN11O75508 207 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ERBB2P04626 1255 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 WNT1P04628 370 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 CD38P28907 300 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 KRT9P35527 623 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 GABRB2P47870 512 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 STK19P49842 368 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ADPRHP54922 357 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 APBA1Q02410 837 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 FAM46CQ5VWP2 391 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 FAM71AQ8IYT1 594 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 GALNT15Q8N3T1 639 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 OR8D1Q8WZ84 308 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 RPRD1AQ96P16 312 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ELF4Q99607 663 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 FEM1AQ9BSK4 669 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 AJAP1Q9UKB5 411 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-206ENST00000484733 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
SCFD1-206ENST00000484733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-206ENST00000484733 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-206ENST00000484733 KCNK3O14649 394 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 DRD3P35462 400 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CDH4P55283 916 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 ZNF177Q13360 481 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CAMK4Q16566 473 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 PTPN20Q4JDL3 420 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 SLC45A4Q5BKX6 768 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 BRMS1LQ5PSV4 323 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms