RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SETD6Q8TBK2 473 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 GRK7Q8WTQ7 553 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 LARP4BQ92615 738 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 SMARCE1Q969G3 411 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 SLC22A18Q96BI1 424 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 FAM149B1Q96BN6 582 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 SLC7A6OSQ96CW6 309 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CEP95Q96GE4 821 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MASTLQ96GX5 879 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 PGAM5Q96HS1 289 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 GCNAQ96QF7 691 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 WDR24Q96S15 920 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 EIF3CQ99613 913 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 PIP5K1AQ99755 562 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 HTATIP2Q9BUP3 242 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 KLHL4Q9C0H6 718 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 KCNH6Q9H252 994 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MROH8Q9H579 483 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 TBCCD1Q9NVR7 557 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 PARPBPQ9NWS1 579 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 UBA2Q9UBT2 640 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 BLOC1S6Q9UL45 172 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 FAM184BQ9ULE4 1060 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 BTBD3Q9Y2F9 522 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 RBM8AQ9Y5S9 174 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 A0A0U1RQK1 487 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 FAM237BA0A1B0GVD1 139 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 hCG_1809904A0A1W2PP81 198 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 A0A1W2PPE2 198 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 A0A1W2PR64 198 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 FRMD3A2A2Y4 597 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF320A2RRD8 509 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 C2orf78A6NCI8 922 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CYP27B1O15528 508 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 TOX4O94842 621 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 LAG3P18627 525 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 HK1P19367 917 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 MCM3P25205 808 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 RBL1P28749 1068 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ICAM3P32942 547 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CASRP41180 1078 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PXNP49023 591 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 LIG4P49917 911 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PGDP52209 483 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 LOXL3P58215 753 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 HGFACQ04756 655 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 RNASELQ05823 741 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 TMEM115Q12893 351 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CCNIQ14094 377 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 UBXN2BQ14CS0 331 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 RAB12Q6IQ22 244 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 TTI2Q6NXR4 508 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CDC73Q6P1J9 531 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PIWIL3Q7Z3Z3 882 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF804AQ7Z570 1209 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 GPR149Q86SP6 731 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 LDLRAD3Q86YD5 345 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 TICAM1Q8IUC6 712 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 SHCBP1Q8NEM2 672 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 OR14K1Q8NGZ2 314 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 SUN3Q8TAQ9 357 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 DNAJB14Q8TBM8 379 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 N4BP2L2Q92802 583 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ATP6V0A1Q93050 837 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PTP4A1Q93096 173 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PERPQ96FX8 193 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 KLHL32Q96NJ5 620 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 SMOQ99835 787 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 FSD1Q9BTV5 496 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 MRPL1Q9BYD6 325 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 OPA3Q9H6K4 179 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 TRMT1Q9NXH9 659 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 POGKQ9P215 609 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 SEC63Q9UGP8 760 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CDH22Q9UJ99 828 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PPIEQ9UNP9 301 aaKnown RBP4.72□□□□□ -1.65
PTCD3-214ENST00000483925 CDYLQ9Y232 598 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 NEU2Q9Y3R4 380 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ATP6V0A2Q9Y487 856 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 PCDHA10Q9Y5I2 948 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 ZMYM3Q14202 1370 aa4.72□□□□□ -1.65
PTCD3-214ENST00000483925 COL15A1P39059 1388 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CAPN14A8MX76 684 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 B5MCH6 92 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 E9PLN8 166 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 POLRMTO00411 1230 aaKnown RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 NDC80O14777 642 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 DCLK1O15075 740 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms