RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NUP205Q92621 2012 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 TLDC2A0PJX2 215 aa26.89■■□□□ 1.89
SHOX2-204ENST00000483851 ERI2A8K979 691 aaKnown RBP26.89■■□□□ 1.89
SHOX2-204ENST00000483851 CDH16O75309 829 aa26.89■■□□□ 1.89
SHOX2-204ENST00000483851 CNPP09543 421 aaKnown RBP26.89■■□□□ 1.89
SHOX2-204ENST00000483851 CAND1Q86VP6 1230 aaKnown RBP26.89■■□□□ 1.89
SHOX2-204ENST00000483851 TDRPQ86YL5 185 aa26.89■■□□□ 1.89
SHOX2-204ENST00000483851 EPS8L3Q8TE67 593 aaKnown RBP26.89■■□□□ 1.89
SHOX2-204ENST00000483851 RABEP2Q9H5N1 569 aa26.89■■□□□ 1.89
SHOX2-204ENST00000483851 VPS37BQ9H9H4 285 aa26.89■■□□□ 1.89
SHOX2-204ENST00000483851 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.89■■□□□ 1.89
SHOX2-204ENST00000483851 KCNK1O00180 336 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 ADH1AP07327 375 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 HARS2P49590 506 aaKnown RBP26.88■■□□□ 1.89
SHOX2-204ENST00000483851 C5orf22Q49AR2 442 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 PALM2Q8IXS6 379 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 NETO2Q8NC67 525 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 CELF6Q96J87 481 aaKnown RBP26.88■■□□□ 1.89
SHOX2-204ENST00000483851 CNOT10Q9H9A5 744 aaKnown RBP26.88■■□□□ 1.89
SHOX2-204ENST00000483851 LGALS13Q9UHV8 139 aa26.88■■□□□ 1.89
SHOX2-204ENST00000483851 NDUFAB1O14561 156 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 COCHO43405 550 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 TLL1O43897 1013 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 GSTA2P09210 222 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 BMPR1AP36894 532 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 IFI35P80217 286 aaPredicted RBP26.87■■□□□ 1.89
SHOX2-204ENST00000483851 FBXL22Q6P050 247 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 LILRA6Q6PI73 481 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 CCDC149Q6ZUS6 474 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 TEKT5Q96M29 485 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 SLC39A8Q9C0K1 460 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 EBAG9O00559 213 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 CXCL14O95715 111 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 OAS1P00973 400 aaKnown RBP26.87■■□□□ 1.89
SHOX2-204ENST00000483851 MMP13P45452 471 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 SLC11A2P49281 568 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 LONRF1Q17RB8 773 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 TMC7Q7Z402 723 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 ANKMY2Q8IV38 441 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 ZSCAN18Q8TBC5 510 aaPredicted RBP26.87■■□□□ 1.89
SHOX2-204ENST00000483851 CENPTQ96BT3 561 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 PPP1R2P1Q96PQ5 205 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 EMILIN2Q9BXX0 1053 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 GBA3Q9H227 469 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 MPP6Q9NZW5 540 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 NR2E3Q9Y5X4 410 aa26.87■■□□□ 1.89
SHOX2-204ENST00000483851 PLXNA4Q9HCM2 1894 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 DFFAO00273 331 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 MATN3O15232 486 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 ACSL4O60488 711 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 MAFKO60675 156 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 ELK3P41970 407 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 SEC24CP53992 1094 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 GPX6P59796 221 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 UBE3AQ05086 875 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 CCT8L2Q96SF2 557 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 WDR83Q9BRX9 315 aaKnown RBP26.86■■□□□ 1.89
SHOX2-204ENST00000483851 SLC24A2Q9UI40 661 aa26.86■■□□□ 1.89
SHOX2-204ENST00000483851 EXOC1LA0A1B0GW35 172 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 TGM5O43548 720 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 FAM107AO95990 144 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 C1RP00736 705 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 HMBSP08397 361 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 PSMB4P28070 264 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 MAPKAPK2P49137 400 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 RAP1GAP2Q684P5 730 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 LRRC8BQ6P9F7 803 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 C3orf62Q6ZUJ4 267 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 ZNF534Q76KX8 674 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 RTL10Q7L3V2 364 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 KLHL5Q96PQ7 755 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 HTATIP2Q9BUP3 242 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 PSMD3O43242 534 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 TACR2P21452 398 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 ANO4Q32M45 955 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 HP1BP3Q5SSJ5 553 aaPredicted RBP26.85■■□□□ 1.89
SHOX2-204ENST00000483851 CHSY1Q86X52 802 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 ZNF473Q8WTR7 871 aaKnown RBP26.85■■□□□ 1.89
SHOX2-204ENST00000483851 IL12RB2Q99665 862 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 ACSS3Q9H6R3 686 aa26.85■■□□□ 1.89
SHOX2-204ENST00000483851 ANAPC1Q9H1A4 1944 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 MYO18AQ92614 2054 aaKnown RBP26.84■■□□□ 1.89
SHOX2-204ENST00000483851 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.84■■□□□ 1.89
SHOX2-204ENST00000483851 F5H5T6 163 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 MYO1CO00159 1063 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 CACNG3O60359 315 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 BANF1O75531 89 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 SUN1O94901 812 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 F11P03951 625 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 CCNB1P14635 433 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 KCNQ1P51787 676 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 YBEYP58557 167 aaPredicted RBP26.84■■□□□ 1.89
SHOX2-204ENST00000483851 KLHL38Q2WGJ6 581 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 TAOK1Q7L7X3 1001 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 KLHDC8BQ8IXV7 354 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 PDCD7Q8N8D1 485 aaKnown RBP26.84■■□□□ 1.89
SHOX2-204ENST00000483851 NDFIP2Q9NV92 336 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 EURLQ9NYK6 297 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 CHMP2BQ9UQN3 213 aa26.84■■□□□ 1.89
SHOX2-204ENST00000483851 ARHGAP42A6NI28 874 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms