RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 LRIT3Q3SXY7 679 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 AADACL2Q6P093 401 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 FAM84AQ96KN4 292 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 SMOQ99835 787 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ARL8BQ9NVJ2 186 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ZFP69BQ9UJL9 534 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 FBXW11Q9UKB1 542 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ADH1AP07327 375 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ZFXP17010 805 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 AMPD1P23109 780 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 MRPS5P82675 430 aaKnown RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 CDC16Q13042 620 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 RTP2Q5QGT7 225 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 DNAJC24Q6P3W2 148 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ITIH5Q86UX2 942 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 SLC35G2Q8TBE7 412 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 CD101Q93033 1021 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 HAUS1Q96CS2 278 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 DGCR14Q96DF8 476 aaKnown RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 THAP2Q9H0W7 228 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 USP29Q9HBJ7 922 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 TBCCD1Q9NVR7 557 aa11.09□□□□□ -0.63
EWSR1-217ENST00000483415 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
EWSR1-217ENST00000483415 CCDC85CA6NKD9 419 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ACSL3O95573 720 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 LATS1O95835 1130 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 KPNA1P52294 538 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ZNF143P52747 638 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 NLRP9Q7RTR0 991 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 RBM38Q9H0Z9 239 aaKnown RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 DZANK1Q9NVP4 752 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ARHGEF38Q9NXL2 777 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 NKIRAS1Q9NYS0 192 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 KIAA1522Q9P206 1035 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 CYTH4Q9UIA0 394 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 PRG3Q9Y2Y8 225 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 F9P00740 461 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ANPEPP15144 967 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 RAP1GDS1P52306 607 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 EPHA5P54756 1037 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 DAOAP59103 153 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 EIF4EBP2Q13542 120 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 CYP1B1Q16678 543 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 MTDHQ86UE4 582 aaKnown RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 PALB2Q86YC2 1186 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 TDHQ8IZJ6 230 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 SNRNP27Q8WVK2 155 aaKnown RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 PRICKLE1Q96MT3 831 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 CPXM1Q96SM3 734 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 CLSTN3Q9BQT9 956 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 TLR9Q9NR96 1032 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 FAIMQ9NVQ4 179 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 TAS2R14Q9NYV8 317 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.64
EWSR1-217ENST00000483415 NAALADL1Q9UQQ1 740 aa11.08□□□□□ -0.64
EWSR1-217ENST00000483415 AP1G1O43747 822 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 IGLV3-25P01717 112 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 CSH1P0DML2 217 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 CSH2P0DML3 217 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 NOS2P35228 1153 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 CHKAP35790 457 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 GALK1P51570 392 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 ROR1Q01973 937 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 PDK4Q16654 411 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
EWSR1-217ENST00000483415 C3orf62Q6ZUJ4 267 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 NUP93Q8N1F7 819 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 ABTB1Q969K4 478 aaPredicted RBP11.07□□□□□ -0.64
EWSR1-217ENST00000483415 NTAN1Q96AB6 310 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 CNPY3Q9BT09 278 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 NUP85Q9BW27 656 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 FAM47DPA6NHR8 397 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 C2CD4BA6NLJ0 364 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 F8W8V4 182 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 LPXNO60711 386 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 ZWINTO95229 277 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 TTC4O95801 387 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 THOC5Q13769 683 aaKnown RBP11.07□□□□□ -0.64
EWSR1-217ENST00000483415 SHHQ15465 462 aa11.07□□□□□ -0.64
EWSR1-217ENST00000483415 CCDC92Q53HC0 331 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms