RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TLR5O60602 858 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 PPP6R2O75170 966 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 NDUFS2O75306 463 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 UBOX5O94941 541 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 ZDHHC11BP0C7U3 371 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 GABRG2P18507 467 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 HOXD13P35453 343 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 WASP42768 502 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 CDH8P55286 799 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SLC14A1Q13336 389 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 E2F5Q15329 346 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 KNOP1Q1ED39 458 aaKnown RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 BBS9Q3SYG4 887 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 PRRT3Q5FWE3 981 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 PRAMEF13Q5VWM6 474 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SCARA5Q6ZMJ2 495 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 HTR3DQ70Z44 454 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 UBE3DQ7Z6J8 389 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 PIP4P1Q86T03 277 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 TADA2BQ86TJ2 420 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 TMEM25Q86YD3 366 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 C12orf56Q8IXR9 622 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 MINDY1Q8N5J2 469 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 DEFB119Q8N690 84 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 TRIML1Q8N9V2 468 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 LINC00301Q8NCQ3 95 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 IPO4Q8TEX9 1081 aaKnown RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 CYB5D2Q8WUJ1 264 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF396Q96N95 335 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 C7orf25Q9BPX7 421 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 BBS2Q9BXC9 721 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 DNAI2Q9GZS0 605 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 FAM124BQ9H5Z6 455 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 FANCLQ9NW38 375 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 IL37Q9NZH6 218 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 WDR35Q9P2L0 1181 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SPAG17Q6Q759 2223 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 TCHHQ07283 1943 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PVALEFA0A1B0GWK0 134 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 A0A1W2PQF6 199 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ESYT3A0FGR9 886 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 NEDD8-MDP1E9PL57 170 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 STX6O43752 255 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SUSD5O60279 629 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CACNG3O60359 315 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CUTAO60888 179 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 YEATS4O95619 227 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 RPN1P04843 607 aaKnown RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 FAM200BP0CF97 657 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CCDC130P13994 396 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 TYRP14679 529 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ATP5C1P36542 298 aaKnown RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CASP4P49662 377 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 MAP3K7CLP57077 242 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SQSTM1Q13501 440 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 STARD3Q14849 445 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ACAP1Q15027 740 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 BMT2Q1RMZ1 405 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SGSM1Q2NKQ1 1148 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PLEKHG6Q3KR16 790 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 KLHDC10Q6PID8 442 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SHISA2Q6UWI4 295 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 KIAA1324Q6UXG2 1013 aaKnown RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 Q6ZS46 218 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 TPGS1Q6ZTW0 290 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PAQR9Q6ZVX9 377 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ACOT1Q86TX2 421 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 UNC93AQ86WB7 457 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 MIB1Q86YT6 1006 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SMYD4Q8IYR2 804 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 FUKQ8N0W3 1084 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 TAF4BQ92750 862 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SLC6A18Q96N87 628 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 GABRG3Q99928 467 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 DPH2Q9BQC3 489 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 IMPG2Q9BZV3 1241 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ZDHHC5Q9C0B5 715 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.17□□□□□ -1.42
CSDE1-207ENST00000483407 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 AKTIPQ9H8T0 292 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 CSNK1G1Q9HCP0 422 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 SLC39A2Q9NP94 309 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 FSCN3Q9NQT6 498 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
CSDE1-207ENST00000483407 KLK13Q9UKR3 277 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms