RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KRT3P12035 628 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 MZF1P28698 734 aaPredicted RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 CTSOP43234 321 aaPredicted RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 GSCP56915 257 aaPredicted RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 RPS14P62263 151 aaKnown RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 DUOXA1Q1HG43 343 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 PEAR1Q5VY43 1037 aaPredicted RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 TRNP1Q6NT89 227 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 PPP1R2P3Q6NXS1 205 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 FAM131BQ86XD5 332 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 SLC41A1Q8IVJ1 513 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 CADM4Q8NFZ8 388 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 HAPLN3Q96S86 360 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 SELENOOQ9BVL4 669 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 CBX8Q9HC52 389 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 TMEM74BQ9NUR3 256 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 SUSD2Q9UGT4 822 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 SLC25A13Q9UJS0 675 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 VPS28Q9UK41 221 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
VARS-225ENST00000482996 PI4KAP42356 2102 aa14.29□□□□□ -0.12
VARS-225ENST00000482996 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 C2CD4BA6NLJ0 364 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 TTC34A8MYJ7 566 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 MUC22E2RYF6 1773 aaPredicted RBP14.28□□□□□ -0.12
VARS-225ENST00000482996 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SIN3BO75182 1162 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 ENDOD1O94919 500 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 RHOCP08134 193 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 C7P10643 843 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 GNSP15586 552 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 TNFAIP3P21580 790 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 PTPN9P43378 593 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 IRAK1P51617 712 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 IRX4P78413 519 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 PTP4A2Q12974 167 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 ASIC2Q16515 512 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 CDO1Q16878 200 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 ARL13BQ3SXY8 428 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SLC23A3Q6PIS1 610 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 ITIH6Q6UXX5 1313 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 BNIPLQ7Z465 357 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 C3orf20Q8ND61 904 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 BAP1Q92560 729 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 RPL10LQ96L21 214 aaKnown RBP14.28□□□□□ -0.12
VARS-225ENST00000482996 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
VARS-225ENST00000482996 FEM1AQ9BSK4 669 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 MUC3BQ9H195 1237 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 PCED1AQ9H1Q7 454 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 RSPH9Q9H1X1 276 aaPredicted RBP14.28□□□□□ -0.12
VARS-225ENST00000482996 MTG2Q9H4K7 406 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 TMEM9BQ9NQ34 198 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 ANLNQ9NQW6 1124 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SLC6A14Q9UN76 642 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 NCKAP1Q9Y2A7 1128 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 TBC1D30Q9Y2I9 924 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 SNX10Q9Y5X0 201 aa14.28□□□□□ -0.12
VARS-225ENST00000482996 DNAH14Q0VDD8 3507 aa14.27□□□□□ -0.12
VARS-225ENST00000482996 LRRC53A6NM62 1247 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 DRGXA6NNA5 263 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 C4orf47A7E2U8 309 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 E9PAM4 449 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 I6L893 689 aaPredicted RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 SRGAP2O75044 1071 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 CNTN5O94779 1100 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 SERPINF2P08697 491 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 KRT83P78385 493 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 GFPT1Q06210 699 aaPredicted RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 NR1I3Q14994 352 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 C15orf59Q2T9L4 293 aaPredicted RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 CCDC14Q49A88 953 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 C6orf118Q5T5N4 469 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 DAB2IPQ5VWQ8 1189 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 ACAD10Q6JQN1 1059 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 STRADAQ7RTN6 431 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 IRF2BP2Q7Z5L9 587 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 SETD3Q86TU7 594 aaPredicted RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 LUZP1Q86V48 1076 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 GANCQ8TET4 914 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 EDEM3Q9BZQ6 932 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 BTBD1Q9H0C5 482 aa14.27□□□□□ -0.13
VARS-225ENST00000482996 PABPC3Q9H361 631 aaKnown RBP14.27□□□□□ -0.13
VARS-225ENST00000482996 CEP192Q8TEP8 1941 aa14.26□□□□□ -0.13
VARS-225ENST00000482996 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
VARS-225ENST00000482996 SIGLEC16A6NMB1 481 aa14.26□□□□□ -0.13
VARS-225ENST00000482996 GJB6O95452 261 aa14.26□□□□□ -0.13
VARS-225ENST00000482996 DESP17661 470 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms