RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 AMFRQ9UKV5 643 aa12.12□□□□□ -0.47
TRAIP-208ENST00000482582 INTS6Q9UL03 887 aaKnown RBP12.12□□□□□ -0.47
TRAIP-208ENST00000482582 MTF2Q9Y483 593 aaPredicted RBP12.12□□□□□ -0.47
TRAIP-208ENST00000482582 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
TRAIP-208ENST00000482582 CACNA1AO00555 2505 aa12.12□□□□□ -0.47
TRAIP-208ENST00000482582 NYNRINQ9P2P1 1898 aaKnown RBP12.12□□□□□ -0.47
TRAIP-208ENST00000482582 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
TRAIP-208ENST00000482582 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 PRRT4C9JH25 899 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 H0Y626 953 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 CLDN11O75508 207 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KRT1P04264 644 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 DCNP07585 359 aaKnown RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 RHOQP17081 205 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ERCC2P18074 760 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 MZF1P28698 734 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 EIF2DP41214 584 aaKnown RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 DGKGP49619 791 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 NUBP1P53384 320 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 PRKCQQ04759 706 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 LMAN2Q12907 356 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KRT81Q14533 505 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 PDK2Q15119 407 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 MFSD7Q6UXD7 560 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KIAA0907Q7Z7F0 614 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KATNAL2Q8IYT4 538 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 PCDH19Q8TAB3 1148 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 FAM3CQ92520 227 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ALG14Q96F25 216 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 PNKPQ96T60 521 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 SLC2A11Q9BYW1 496 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KLC2Q9H0B6 622 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TMEM248Q9NWD8 314 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
TRAIP-208ENST00000482582 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 HCN2Q9UL51 889 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 SLC27A6Q9Y2P4 619 aa12.11□□□□□ -0.47
TRAIP-208ENST00000482582 A0A0A0MRY4 1105 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 A0A0D9SEW6 157 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 WASH4PA8MWX3 477 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 H3BRJ5 948 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 K7EQS6 105 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 DCLK1O15075 740 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 KAT7O95251 611 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 EGFP01133 1207 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
TRAIP-208ENST00000482582 OR1E1P30953 314 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 HTR7P34969 479 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ARL4AP40617 200 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 CSKP41240 450 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 CDKN2BP42772 138 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ID4P47928 161 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 DNA2P51530 1060 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ADCY2Q08462 1091 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 FZD5Q13467 585 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 CDH18Q13634 790 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TAZQ16635 292 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ANKRD20A8PQ5CZ79 823 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ZNF569Q5MCW4 686 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 RNF219Q5W0B1 726 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ZNF852Q6ZMS4 543 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 ADIPOR2Q86V24 386 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 NPWQ8N729 165 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 PQLC3Q8N755 202 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAIP-208ENST00000482582 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TERB1Q8NA31 727 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TRIM58Q8NG06 486 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 FAF2Q96CS3 445 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
TRAIP-208ENST00000482582 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms