RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 INTS2Q9H0H0 1204 aaKnown RBP4.35□□□□□ -1.71
VPS41-212ENST00000482217 ISCUQ9H1K1 167 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 GPR35Q9HC97 309 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 ERVK-5Q9HDB9 667 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 TRPV5Q9NQA5 729 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 QPCTLQ9NXS2 382 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS41-212ENST00000482217 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 GRID1Q9ULK0 1009 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 CAMK2AQ9UQM7 478 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 PIN4Q9Y237 131 aaKnown RBP4.35□□□□□ -1.71
VPS41-212ENST00000482217 TSC22D4Q9Y3Q8 395 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 TCAF1Q9Y4C2 921 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 ASB3Q9Y575 518 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 PCDHGA5Q9Y5G8 931 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 PCDHGA1Q9Y5H4 931 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 TTC41PQ6P2S7 1318 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 WDR19Q8NEZ3 1342 aa4.35□□□□□ -1.71
VPS41-212ENST00000482217 ZNF335Q9H4Z2 1342 aaPredicted RBP4.35□□□□□ -1.71
VPS41-212ENST00000482217 hCG_1809904A0A1W2PP81 198 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 A0A1W2PPE2 198 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 A0A1W2PR64 198 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PRSS29PA6NIE9 313 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 DIRC3C9JPN6 131 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 F8VZ95 297 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PODXLO00592 558 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SCAMP1O15126 338 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 POLR3GO15318 223 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 MAGEB3O15480 346 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 RNF113AO15541 343 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 CA12O43570 354 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PEX11AO75192 247 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 CHEK2O96017 543 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 AHSGP02765 367 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 GNAI2P04899 355 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 GJB1P08034 283 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PCNAP12004 261 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 MYL4P12829 197 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 BRAFP15056 766 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 NPR1P16066 1061 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PRLRP16471 622 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 HK1P19367 917 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 EN2P19622 333 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 CCNA2P20248 432 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SLC7A1P30825 629 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 ALDH1B1P30837 517 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 HIBADHP31937 336 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 KRT2P35908 639 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 TCF7P36402 384 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 GP5P40197 560 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 GARSP41250 739 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 ARCN1P48444 511 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 SUMO3P55854 103 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 SOX8P57073 446 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 TRA2BP62995 288 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 EPS8Q12929 822 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 RPA4Q13156 261 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 CAMK2DQ13557 499 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 PUM1Q14671 1186 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS41-212ENST00000482217 HFEQ30201 348 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 C2orf76Q3KRA6 126 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SLC25A24Q6NUK1 477 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 C15orf52Q6ZUT6 534 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 CENPQQ7L2Z9 268 aaPredicted RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 RABEPKQ7Z6M1 372 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 UNC5CLQ8IV45 518 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 DIS3L2Q8IYB7 885 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 SFRP1Q8N474 314 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 AADATQ8N5Z0 425 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 C10orf53Q8N6V4 93 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 TDRD5Q8NAT2 981 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 ANKRD20A12PQ8NF67 263 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 OR6J1Q8NGC5 347 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 OR56B2PQ8NGI1 322 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 RFWD2Q8NHY2 731 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SCAMP5Q8TAC9 235 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SPATA20Q8TB22 786 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 DEPDC1BQ8WUY9 529 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 TBC1D5Q92609 795 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 CASP10Q92851 521 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 TUBGCP3Q96CW5 907 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 WWC2-AS2Q96NR7 200 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 DCLRE1CQ96SD1 692 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 ABHD1Q96SE0 405 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 MAK16Q9BXY0 300 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 CAPS2Q9BXY5 557 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 GPR87Q9BY21 358 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 MTMR12Q9C0I1 747 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 IQCGQ9H095 443 aaKnown RBP4.34□□□□□ -1.71
VPS41-212ENST00000482217 BRD8Q9H0E9 1235 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SIK2Q9H0K1 926 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 GLT8D2Q9H1C3 349 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 PCED1AQ9H1Q7 454 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 EHD1Q9H4M9 534 aa4.34□□□□□ -1.71
VPS41-212ENST00000482217 SAYSD1Q9NPB0 183 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms