RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CD70P32970 193 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ZNF131P52739 623 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 MAPK10P53779 464 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ST8SIA6P61647 398 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
USP11-208ENST00000480104 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 WFDC5Q8TCV5 224 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 FZD3Q9NPG1 666 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
USP11-208ENST00000480104 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 GOLGA8IPA6NC78 632 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 GOLGA8JA6NMD2 632 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 TTC34A8MYJ7 566 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 STMND1H3BQB6 276 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 NKX2-8O15522 239 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 AQP9O43315 295 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 PLRG1O43660 514 aaKnown RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 HOXB4P17483 251 aaPredicted RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 MZF1P28698 734 aaPredicted RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 RPIAP49247 311 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 MAP3K7CLP57077 242 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 COG7P83436 770 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 FGL2Q14314 439 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 DHX8Q14562 1220 aaKnown RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 POSTNQ15063 836 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 STK40Q8N2I9 435 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 APOBEC4Q8WW27 367 aaKnown RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 KLK6Q92876 244 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 NKD1Q969G9 470 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 FAM131CQ96AQ9 280 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 GFM1Q96RP9 751 aaKnown RBP12.34□□□□□ -0.43
USP11-208ENST00000480104 BOCQ9BWV1 1114 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 INTS13Q9NVM9 706 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 DAAM1Q9Y4D1 1078 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
USP11-208ENST00000480104 DUX1O43812 170 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
USP11-208ENST00000480104 IL1BP01584 269 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
USP11-208ENST00000480104 DDIT3P35638 169 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 CLDN2P57739 230 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 GCNT7Q6ZNI0 430 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 SCD5Q86SK9 330 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 TADA2BQ86TJ2 420 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
USP11-208ENST00000480104 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 TMEM74Q96NL1 305 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 IL12RB2Q99665 862 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 RABGEF1Q9UJ41 708 aa12.33□□□□□ -0.44
USP11-208ENST00000480104 EDDM13A0A1B0GTR0 161 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
USP11-208ENST00000480104 PFKFB2O60825 505 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 TNNC2P02585 160 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CSF2P04141 144 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CCDC130P13994 396 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 ITGB7P26010 798 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 ABCD1P33897 745 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CSKP41240 450 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 SGSHP51688 502 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 TNNC1P63316 161 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CCL7P80098 99 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CDC20Q12834 499 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 TRIM29Q14134 588 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 FZD2Q14332 565 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 IL17AQ16552 155 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 ZXDCQ2QGD7 858 aaPredicted RBP12.32□□□□□ -0.44
USP11-208ENST00000480104 DEFB109BQ30KR1 87 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 HYIQ5T013 277 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 PPP1R26Q5T8A7 1209 aaPredicted RBP12.32□□□□□ -0.44
USP11-208ENST00000480104 AGBL4Q5VU57 503 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 PTAR1Q7Z6K3 402 aaPredicted RBP12.32□□□□□ -0.44
USP11-208ENST00000480104 MCEMP1Q8IX19 187 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 SDR16C5Q8N3Y7 309 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 PRR7Q8TB68 274 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 PTPRN2Q92932 1015 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 GLMNQ92990 594 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 EPAS1Q99814 870 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 KLF15Q9UIH9 416 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 PADI4Q9UM07 663 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms