RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 KDM1BQ8NB78 822 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CCDC112Q8NEF3 446 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ANP32BQ92688 251 aaKnown RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 MAGEB5Q9BZ81 275 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 DHX35Q9H5Z1 703 aaKnown RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CATSPERBQ9H7T0 1116 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 TMEM248Q9NWD8 314 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 DONSONQ9NYP3 566 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 INTS6Q9UL03 887 aaKnown RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 NEU3Q9UQ49 428 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 A0A0A6YYK5 440 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 CCDC163A0A0D9SF12 145 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 WASH4PA8MWX3 477 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 H0Y858 1186 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 K7ESF4 209 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 EEF2KO00418 725 aaKnown RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 FGF10O15520 208 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ALDH1A2O94788 518 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SP9P0CG40 484 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 TDGF1P13385 188 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 HOXB2P14652 356 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 COL9A1P20849 921 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 IL1R2P27930 398 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 MZF1P28698 734 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ETFBP38117 255 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 IL12RB1P42701 662 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SLC1A1P43005 524 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SSR1P43307 286 aaKnown RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 TPI1P60174 286 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ST8SIA6P61647 398 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ZNF234Q14588 700 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 MESDQ14696 234 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 STARD3Q14849 445 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 DPYSL2Q16555 572 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 CA9Q16790 459 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 PTPRNQ16849 979 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 RNF219Q5W0B1 726 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 TSSK4Q6SA08 328 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SERPINA13PQ6UXR4 307 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 APCDD1Q8J025 514 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 TSTD1Q8NFU3 115 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 SORCS1Q8WY21 1168 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ALG14Q96F25 216 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ACOX2Q99424 681 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-219ENST00000479941 MUC3BQ9H195 1237 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 CACNA2D2Q9NY47 1150 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 VPS28Q9UK41 221 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 STON1Q9Y6Q2 735 aa11.12□□□□□ -0.63
ATG4B-219ENST00000479941 DOCK4Q8N1I0 1966 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 BTNL10A8MVZ5 291 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 WASH3PC4AMC7 463 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 DAPK3O43293 454 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 NRDCO43847 1150 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 APBB3O95704 486 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 EPHX1P07099 455 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 KRT7P08729 469 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 RARAP10276 462 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 TCF4P15884 667 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 NNMTP40261 264 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 WASP42768 502 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 HCAR3P49019 387 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 VAV2P52735 878 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 SMTNL2Q2TAL5 461 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 FNDC3BQ53EP0 1204 aaKnown RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 PPP6R3Q5H9R7 873 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 LRRC8AQ8IWT6 810 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 RTL3Q8N8U3 475 aaKnown RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 ACRBPQ8NEB7 543 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 OR52K2Q8NGK3 314 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 HSPH1Q92598 858 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 NELL1Q92832 810 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 KCTD15Q96SI1 283 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 MAGEH1Q9H213 219 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 TMEM245Q9H330 911 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms