RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAT2AP31153 395 aaKnown RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 DRD3P35462 400 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 RPS24P62847 133 aaKnown RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 VAC14Q08AM6 782 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 SETMARQ53H47 684 aaPredicted RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 CDCP2Q5VXM1 449 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 NADSYN1Q6IA69 706 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 TTC9Q92623 222 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.25
DDX56-210ENST00000479440 FAM131CQ96AQ9 280 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 PAGE5Q96GU1 130 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 SERPINB11Q96P15 392 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 SEMA4CQ9C0C4 833 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 POLR1BQ9H9Y6 1135 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 KNL1Q8NG31 2342 aa16.64■□□□□ 0.25
DDX56-210ENST00000479440 CYSRT1A8MQ03 144 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
DDX56-210ENST00000479440 USP12O75317 370 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 LTFP02788 710 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 GP1BAP07359 652 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 VDRP11473 427 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 CKMT1AP12532 417 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 LSSP48449 732 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 NNTQ13423 1086 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 LY6DQ14210 128 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 MS4A13Q5J8X5 152 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 FAM46CQ5VWP2 391 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 MMS22LQ6ZRQ5 1243 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 SNRNP27Q8WVK2 155 aaKnown RBP16.63■□□□□ 0.25
DDX56-210ENST00000479440 PTPRN2Q92932 1015 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 NUCKS1Q9H1E3 243 aaKnown RBP16.63■□□□□ 0.25
DDX56-210ENST00000479440 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
DDX56-210ENST00000479440 TENM4Q6N022 2769 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 SLC28A2O43868 658 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 OPA1O60313 960 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 RNGTTO60942 597 aaKnown RBP16.62■□□□□ 0.25
DDX56-210ENST00000479440 CSO75390 466 aaKnown RBP16.62■□□□□ 0.25
DDX56-210ENST00000479440 DGKAP23743 735 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 CUL2Q13617 745 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 FSCBQ5H9T9 825 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 TMC6Q7Z403 805 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 UBA3Q8TBC4 463 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 OR8D1Q8WZ84 308 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 CCDC97Q96F63 343 aaPredicted RBP16.62■□□□□ 0.25
DDX56-210ENST00000479440 MED8Q96G25 268 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 KLHDC7BQ96G42 594 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 RPL10LQ96L21 214 aaKnown RBP16.62■□□□□ 0.25
DDX56-210ENST00000479440 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
DDX56-210ENST00000479440 USP29Q9HBJ7 922 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 TJP2Q9UDY2 1190 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 SLCO3A1Q9UIG8 710 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 TLR6Q9Y2C9 796 aa16.62■□□□□ 0.25
DDX56-210ENST00000479440 KNTC1P50748 2209 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 A0A1B0GVM2 712 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 O00370 1275 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 FFAR2O15552 330 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 RTN2O75298 545 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 WISP1O95388 367 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 STK19P49842 368 aaPredicted RBP16.61■□□□□ 0.25
DDX56-210ENST00000479440 DUSP3P51452 185 aaPredicted RBP16.61■□□□□ 0.25
DDX56-210ENST00000479440 SULT2A1Q06520 285 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 ADAM9Q13443 819 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 SLC12A1Q13621 1099 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 DCAF6Q58WW2 860 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 IGF2-ASQ6U949 168 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 CFAP52Q8N1V2 620 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 MYEOVQ96EZ4 313 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 VCPIP1Q96JH7 1222 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 ABCG4Q9H172 646 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 PREBQ9HCU5 417 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 ASCL3Q9NQ33 180 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 KIAA1257Q9ULG3 409 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 CFAP46Q8IYW2 2715 aa16.61■□□□□ 0.25
DDX56-210ENST00000479440 PIAS2O75928 621 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 FBXO21O94952 628 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
DDX56-210ENST00000479440 APOEP02649 317 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 THEGLP0DJG4 465 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
DDX56-210ENST00000479440 RGS7P49802 495 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 AGBL4Q5VU57 503 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 CHSY1Q86X52 802 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 APCDD1Q8J025 514 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 SLC25A45Q8N413 288 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 KLHL11Q9NVR0 708 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 NLGN3Q9NZ94 848 aa16.6■□□□□ 0.25
DDX56-210ENST00000479440 PYCARD-AS1I3L0S3 204 aa16.59■□□□□ 0.25
DDX56-210ENST00000479440 K7ENP7 123 aa16.59■□□□□ 0.25
DDX56-210ENST00000479440 ALOX15BO15296 676 aa16.59■□□□□ 0.25
DDX56-210ENST00000479440 LZTS3O60299 673 aaPredicted RBP16.59■□□□□ 0.25
DDX56-210ENST00000479440 RHOBTB3O94955 611 aa16.59■□□□□ 0.25
DDX56-210ENST00000479440 TBXAS1P24557 533 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms