RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	NAB1	Q13506	487 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	PAFAH1B3	Q15102	231 aa	Known RBP	28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	HSF5	Q4G112	596 aa	Predicted RBP	28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	KYAT3	Q6YP21	454 aa	Known RBP	28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	C4orf50	Q6ZRC1	276 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	PAQR9	Q6ZVX9	377 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	TTC7B	Q86TV6	843 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	UNC5B	Q8IZJ1	945 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	CRIPAK	Q8N1N5	446 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	ARNTL2	Q8WYA1	636 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	ZNF570	Q96NI8	536 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	SLC2A13	Q96QE2	648 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	CRTAC1	Q9NQ79	661 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	TMPRSS4	Q9NRS4	437 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	PCDH10	Q9P2E7	1040 aa		28.19	■■■□□ 2.1
CHKB-208	ENST00000479003	CCDC195	A0A1B0GUA6	201 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003		F5H423	210 aa	Predicted RBP	28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	BEST1	O76090	585 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	PGAM1	P18669	254 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	LHX1	P48742	406 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	CASC4	Q6P4E1	433 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	DCLRE1A	Q6PJP8	1040 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	RSPH1	Q8WYR4	309 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	CDKL2	Q92772	493 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	NMUR2	Q9GZQ4	415 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003		M0QYT0	321 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003		M0QZQ0	153 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	CLDN5	O00501	218 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	MGAT1	P26572	445 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	MDH1B	Q5I0G3	518 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	ARID3B	Q8IVW6	561 aa	Predicted RBP	28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	ABI1	Q8IZP0	508 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	VWCE	Q96DN2	955 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	RTP3	Q9BQQ7	232 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	LRRC4	Q9HBW1	653 aa		28.18	■■■□□ 2.1
CHKB-208	ENST00000479003	CLTB	P09497	229 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	ESRRA	P11474	423 aa	Predicted RBP	28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	CRADD	P78560	199 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	WASHC5	Q12768	1159 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	DPYS	Q14117	519 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	PACS1	Q6VY07	963 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	RINL	Q6ZS11	566 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	ALYREF	Q86V81	257 aa	Known RBP	28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	CRLF3	Q8IUI8	442 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	MAB21L3	Q8N8X9	362 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	TTC8	Q8TAM2	541 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	CASD1	Q96PB1	797 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	SYT15	Q9BQS2	421 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	NAT9	Q9BTE0	207 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	HCST	Q9UBK5	93 aa		28.17	■■■□□ 2.1
CHKB-208	ENST00000479003	PPP1R12A	O14974	1030 aa	Predicted RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	GYG2	O15488	501 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	PARN	O95453	639 aa	Known RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	LMNA	P02545	664 aa	Known RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	PSMB4	P28070	264 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	NDUFV1	P49821	464 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	SESN2	P58004	480 aa	Predicted RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	CRYM	Q14894	314 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	SYPL2	Q5VXT5	272 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	CLEC20A	Q6ZU45	233 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	WWP1	Q9H0M0	922 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	PRDM12	Q9H4Q4	367 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	ZNF395	Q9H8N7	513 aa	Predicted RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	IGSF9	Q9P2J2	1179 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	LRFN2	Q9ULH4	789 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	CREB3	O43889	395 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	ENTPD5	O75356	428 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	OR1G1	P47890	313 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	DEUP1	Q05D60	604 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	RFWD3	Q6PCD5	774 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	ZNF567	Q8N184	647 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	NETO2	Q8NC67	525 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	SUSD3	Q96L08	255 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	TAS2R1	Q9NYW7	299 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	SUFU	Q9UMX1	484 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	PRG3	Q9Y2Y8	225 aa	Predicted RBP	28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	MICAL3	Q7RTP6	2002 aa		28.16	■■■□□ 2.1
CHKB-208	ENST00000479003	SYNJ2BP-COX16	A0A087WUM0	186 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	CLNS1A	P54105	237 aa	Known RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	STX3	Q13277	289 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	RFX8	Q6ZV50	586 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	SIX6OS1	Q8N1H7	587 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	COX16	Q9P0S2	106 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	HBS1L	Q9Y450	684 aa	Known RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	MYBPHL	A2RUH7	354 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	EEF2K	O00418	725 aa	Known RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	DCLK1	O15075	740 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	TOP3B	O95985	862 aa	Known RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	GSR	P00390	522 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	ALDOA	P04075	364 aa	Known RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	CYP11A1	P05108	521 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	ITGB8	P26012	769 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	CCNY	Q8ND76	341 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	KCNV2	Q8TDN2	545 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	FAM193B	Q96PV7	902 aa	Predicted RBP	28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	SLC9A7	Q96T83	725 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	CEP41	Q9BYV8	373 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	C20orf27	Q9GZN8	174 aa		28.15	■■■□□ 2.1
CHKB-208	ENST00000479003	PIGV	Q9NUD9	493 aa		28.15	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms