RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 TUBA3CQ13748 450 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 TRIM60Q495X7 471 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 LY6G5CQ5SRR4 150 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 TMTC4Q5T4D3 741 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 ABHD17BQ5VST6 288 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 RAP1GAP2Q684P5 730 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 TUBA3EQ6PEY2 450 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 ATG9AQ7Z3C6 839 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 GPR149Q86SP6 731 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 ZNF354CQ86Y25 554 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 RAB11FIP4Q86YS3 637 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 FOXP4Q8IVH2 680 aaPredicted RBP6.54□□□□□ -1.36
SSR3-207ENST00000478842 USP38Q8NB14 1042 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 MBD3L2Q8NHZ7 208 aaPredicted RBP6.54□□□□□ -1.36
SSR3-207ENST00000478842 SLC30A5Q8TAD4 765 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 SSH3Q8TE77 659 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 ATG4AQ8WYN0 398 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 HIST1H2AAQ96QV6 131 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 PRPF18Q99633 342 aaKnown RBP6.54□□□□□ -1.36
SSR3-207ENST00000478842 ALG8Q9BVK2 526 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 TMEM120AQ9BXJ8 343 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 NRDE2Q9H7Z3 1164 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 FLRT1Q9NZU1 646 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 LUZP4Q9P127 313 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 PI4KBQ9UBF8 816 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 TESQ9UGI8 421 aaKnown RBP6.54□□□□□ -1.36
SSR3-207ENST00000478842 USP22Q9UPT9 525 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 DTNAQ9Y4J8 743 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 FOCADQ5VW36 1801 aa6.54□□□□□ -1.36
SSR3-207ENST00000478842 CHD9Q3L8U1 2897 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 SIPA1L1O43166 1804 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 C1QTNF3-AMACRE9PGA6 284 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 ACKR2O00590 384 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 PPM1DO15297 605 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 SLC16A3O15427 465 aaKnown RBP6.53□□□□□ -1.36
SSR3-207ENST00000478842 SEPT4O43236 478 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 CYBAP13498 195 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 NPPBP16860 134 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 MECOMQ03112 1051 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 ATP1A4Q13733 1029 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 GRB14Q14449 540 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 DEPDC1Q5TB30 811 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 VWA1Q6PCB0 445 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 KCNV1Q6PIU1 500 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 RFX8Q6ZV50 586 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 RASGRP3Q8IV61 690 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 IZUMO1Q8IYV9 350 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 TRPV1Q8NER1 839 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 TMEM171Q8WVE6 324 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 GRAMD1AQ96CP6 724 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 KATNAL1Q9BW62 490 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 VN1R3Q9BXE9 311 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 USP44Q9H0E7 712 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 MAGEH1Q9H213 219 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 GLOD4Q9HC38 313 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 CASS4Q9NQ75 786 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 TRIM36Q9NQ86 728 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 SH2B3Q9UQQ2 575 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 SNX14Q9Y5W7 946 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 HS3ST4Q9Y661 456 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 CDK5RAP2Q96SN8 1893 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 PLXNA1Q9UIW2 1896 aa6.53□□□□□ -1.36
SSR3-207ENST00000478842 CENPVL1A0A0U1RR11 272 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 PIPSLA2A3N6 862 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 AQP12BA6NM10 295 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 CNMDO75829 334 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ONECUT2O95948 504 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ITGA2BP08514 1039 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 CLTBP09497 229 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 EGR2P11161 476 aaPredicted RBP6.52□□□□□ -1.37
SSR3-207ENST00000478842 ITGAMP11215 1152 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 HSD3B1P14060 373 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 HGFP14210 728 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 CD19P15391 556 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 PECAM1P16284 738 aaPredicted RBP6.52□□□□□ -1.37
SSR3-207ENST00000478842 RBL1P28749 1068 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ADORA2AP29274 412 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 IL15P40933 162 aaPredicted RBP6.52□□□□□ -1.37
SSR3-207ENST00000478842 ATXN1P54253 815 aaKnown RBP6.52□□□□□ -1.37
SSR3-207ENST00000478842 TLE2Q04725 743 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 SCAPQ12770 1279 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 FOXE3Q13461 319 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 BIRC3Q13489 604 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 CLCA4Q14CN2 919 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 AAK1Q2M2I8 961 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ARHGAP15Q53QZ3 475 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ZNF618Q5T7W0 954 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ABLIM2Q6H8Q1 611 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 TTC30AQ86WT1 665 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 TOR1AIP2Q8NFQ8 470 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 RSC1A1Q92681 617 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 FKBP10Q96AY3 582 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 RSPRY1Q96DX4 576 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 ZNF503Q96F45 646 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 C12orf42Q96LP6 360 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 NUDT22Q9BRQ3 303 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 C17orf80Q9BSJ5 609 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 KLC4Q9NSK0 619 aa6.52□□□□□ -1.37
SSR3-207ENST00000478842 KCTD5Q9NXV2 234 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms