RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PGM5Q15124 567 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 CTXN3Q4LDR2 81 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 ARL13AQ5H913 290 aaPredicted RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF484Q5JVG2 852 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 C10orf25Q5T742 122 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 CYB5R4Q7L1T6 521 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 RTL10Q7L3V2 364 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 KLBQ86Z14 1044 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 HERC6Q8IVU3 1022 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 SMAP1Q8IYB5 467 aaPredicted RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 VPS52Q8N1B4 723 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PIGOQ8TEQ8 1089 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PIMREGQ9BSJ6 248 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 HDHD5Q9BXW7 423 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC29A3Q9BZD2 475 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 RMI1Q9H9A7 625 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 NOD2Q9HC29 1040 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 TRNAU1APQ9NX07 287 aaKnown RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 ARL15Q9NXU5 204 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 TUBA8Q9NY65 449 aaPredicted RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 DTX4Q9Y2E6 619 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PKP3Q9Y446 797 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF335Q9H4Z2 1342 aaPredicted RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ZMYM2Q9UBW7 1377 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 SAC3D1A6NKF1 404 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 KCNJ18B7U540 433 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 STX16-NPEPL1H3BU86 382 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 STX16O14662 325 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 PRPF4O43172 522 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■□□□□ 10.2
SMARCA1-204ENST00000478420 MSI1O43347 362 aaKnown RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 FGBP02675 491 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 CSF1P09603 554 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 CDK4P11802 303 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ACP5P13686 325 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 TNNT1P13805 278 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 PKMP14618 531 aaKnown RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 GSTM2P28161 218 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 CIITAP33076 1130 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 STAT1P42224 750 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 THOC5Q13769 683 aaKnown RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 TAF12Q16514 161 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 GXYLT1Q4G148 440 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 RUNDC3AQ59EK9 446 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 PXDC1Q5TGL8 231 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ZKSCAN2Q63HK3 967 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ISM2Q6H9L7 571 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 SLC30A9Q6PML9 568 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ANKRD44Q8N8A2 993 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 IP6K1Q92551 441 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 RBM17Q96I25 401 aaKnown RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 COG8Q96MW5 612 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 SLC22A11Q9NSA0 550 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 THAP1Q9NVV9 213 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 TERF2IPQ9NYB0 399 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF70Q9UC06 446 aaPredicted RBP4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 KLQ9UEF7 1012 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 FBXO4Q9UKT5 387 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 DNAJC16Q9Y2G8 782 aa4.33□□□□□ -1.72
SMARCA1-204ENST00000478420 CXorf65A6NEN9 183 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 RHODO00212 210 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 EIF3FO00303 357 aaPredicted RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 CNOT3O75175 753 aaKnown RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 TOP3BO95985 862 aaKnown RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 CYP19A1P11511 503 aaPredicted RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 CYP4B1P13584 511 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 CHRNA5P30532 468 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 PLCD1P51178 756 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 SLC12A1Q13621 1099 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 ANKRD1Q15327 319 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 DLGAP5Q15398 846 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 ETFDHQ16134 617 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM95Q3KNT9 176 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 MIDNQ504T8 468 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 SCN4BQ8IWT1 228 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 NANOGP1Q8N7R0 232 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 LINS1Q8NG48 757 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 C16orf52Q8NHV5 167 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 IGFBPL1Q8WX77 278 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 CLMNQ96JQ2 1002 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 HERC2P3Q9BVR0 1158 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 MAF1Q9H063 256 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 UTS2RQ9UKP6 389 aa4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 AGO2Q9UKV8 859 aaKnown RBP4.32□□□□□ -1.72
SMARCA1-204ENST00000478420 LAMP3Q9UQV4 416 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms