RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PAK1Q13153 545 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 PDCLQ13371 301 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 SHBQ15464 509 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 C19orf48Q6RUI8 117 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 ADAT2Q7Z6V5 191 aaKnown RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 CCDC117Q8IWD4 279 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 MED15Q96RN5 788 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 OMDQ99983 421 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 TRIM62Q9BVG3 475 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 ACE2Q9BYF1 805 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 DKK4Q9UBT3 224 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 ASXL3Q9C0F0 2248 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 MYLKQ15746 1914 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 LRRC72A6NJI9 287 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 THAP12O43422 761 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 MED7O43513 233 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 DFNA5O60443 496 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 GOT1P17174 413 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 GNA15P30679 374 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 PSMD8P48556 350 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 NUMBP49757 651 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 CCR5P51681 352 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 PLK1P53350 603 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 APBA1Q02410 837 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 SLC12A1Q13621 1099 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 SMAD1Q15797 465 aaKnown RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 CXorf57Q6NSI4 855 aaKnown RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 SND1Q7KZF4 910 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 GATAD2AQ86YP4 633 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 FRS2Q8WU20 508 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 FAM131CQ96AQ9 280 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 ALG14Q96F25 216 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 SLC2A13Q96QE2 648 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 ELF4Q99607 663 aaPredicted RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 CRACR2AQ9BSW2 395 aa17.24■□□□□ 0.35
TRIM13-208ENST00000478111 GCN1Q92616 2671 aaKnown RBP17.24■□□□□ 0.35
TRIM13-208ENST00000478111 TRABD2BA6NFA1 517 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 F5H5T6 163 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 PDGFRAP16234 1089 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 SLC9A1P19634 815 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 C5AR1P21730 350 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 CD38P28907 300 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 DRD3P35462 400 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 METAP1P53582 386 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 ADPRHP54922 357 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 C21orf59P57076 290 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 TRIM65Q6PJ69 517 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 ENOSF1Q7L5Y1 443 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 DEFB106AQ8N104 65 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 GALNT15Q8N3T1 639 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 OR52K2Q8NGK3 314 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 SAP25Q8TEE9 199 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 CPXM1Q96SM3 734 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 RAXQ9Y2V3 346 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 CEP83Q9Y592 693 aa17.23■□□□□ 0.35
TRIM13-208ENST00000478111 FAM149AA5PLN7 773 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 LATO43561 262 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 ADH1BP00325 375 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 GLI1P08151 1106 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 VASPP50552 380 aaPredicted RBP17.22■□□□□ 0.35
TRIM13-208ENST00000478111 IRAK1P51617 712 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 PPP2CBP62714 309 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 PPP2CAP67775 309 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 ELAVL3Q14576 367 aaKnown RBP17.22■□□□□ 0.35
TRIM13-208ENST00000478111 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 RNF219Q5W0B1 726 aaPredicted RBP17.22■□□□□ 0.35
TRIM13-208ENST00000478111 FBXL22Q6P050 247 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 DHRS13Q6UX07 377 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 OR14C36Q8NHC7 312 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 ASNSD1Q9NWL6 643 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 ARHGAP20Q9P2F6 1191 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 SARDHQ9UL12 918 aa17.22■□□□□ 0.35
TRIM13-208ENST00000478111 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 A0A1B0GVM2 712 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 TCAF2A6NFQ2 919 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 CBX4O00257 560 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 PLK4O00444 970 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 IL1BP01584 269 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 CCR1P32246 355 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 CDK17Q00537 523 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 SULT2A1Q06520 285 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 CYP4F3Q08477 520 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 BECN1Q14457 450 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 TTC39BQ5VTQ0 682 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-208ENST00000478111 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-208ENST00000478111 IRF2BP1Q8IU81 584 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 SHC3Q92529 594 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 SPAG5Q96R06 1193 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 AASDHPPTQ9NRN7 309 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 DDIT4Q9NX09 232 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 APEX2Q9UBZ4 518 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 FTSJ1Q9UET6 329 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms