RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LCLAT1Q6UWP7 414 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 UBE2Q1Q7Z7E8 422 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RPAINQ86UA6 219 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 VSIG1Q86XK7 387 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MAP7D3Q8IWC1 876 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FBXO16Q8IX29 292 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PALM2Q8IXS6 379 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PDIK1LQ8N165 341 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ARFGAP1Q8N6T3 406 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 LINC01465Q8N7H1 131 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 KCTD6Q8NC69 237 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FBXO15Q8NCQ5 510 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF398Q8TD17 642 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC8CQ8TDW0 803 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TRAPPC12Q8WVT3 735 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TEKT4Q8WW24 435 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CPT1BQ92523 772 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ACSF2Q96CM8 615 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 KLHL29Q96CT2 875 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CDCA5Q96FF9 252 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 HPDLQ96IR7 371 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ASB2Q96Q27 587 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RAB3IPQ96QF0 476 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CPXM1Q96SM3 734 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM121Q9BTD3 319 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 DHRS4Q9BTZ2 278 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 NT5C1AQ9BXI3 368 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MAK16Q9BXY0 300 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PITPNM3Q9BZ71 974 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ELOVL4Q9GZR5 314 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PDZD7Q9H5P4 517 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 SMYD3Q9H7B4 428 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 IFT122Q9HBG6 1241 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MLXIPLQ9NP71 852 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 VTA1Q9NP79 307 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TXLNGQ9NUQ3 528 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 THEGQ9P2T0 379 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RBPJLQ9UBG7 517 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CYTH4Q9UIA0 394 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 BARX2Q9UMQ3 279 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 USP18Q9UMW8 372 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 DERAQ9Y315 318 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 C2CD2Q9Y426 696 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 USH1CQ9Y6N9 552 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CLUHO75153 1309 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 HTTP42858 3142 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 A0A087WZ62 844 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 IQANK1A0A1B0GTG1 560 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 C2CD4BA6NLJ0 364 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 FOXO6A8MYZ6 492 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CHADO15335 359 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TYROBPO43914 113 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PRPSAP2O60256 369 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PEX10O60683 326 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 EDF1O60869 148 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 LGALS2P05162 132 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 GSTA2P09210 222 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 INSRRP14616 1297 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CCNB1P14635 433 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 EZRP15311 586 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ARF4P18085 180 aaPredicted RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 YARSP54577 528 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CDH6P55285 790 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CDH8P55286 799 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 GPX6P59796 221 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 NHLH1Q02575 133 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PWP1Q13610 501 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DPYSL3Q14195 570 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 KRT81Q14533 505 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 KCNJ11Q14654 390 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 SMTNL2Q2TAL5 461 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 SLC10A6Q3KNW5 377 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DCAF4L1Q3SXM0 396 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 BBS9Q3SYG4 887 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 BOLA3Q53S33 107 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 KCNT1Q5JUK3 1230 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 FNBP1LQ5T0N5 605 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 WLSQ5T9L3 541 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ANKRD22Q5VYY1 191 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 OR6B2Q6IFH4 312 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CGB2Q6NT52 195 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DARS2Q6PI48 645 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 LVRNQ6Q4G3 990 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 C4orf22Q6V702 233 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 FAM47EQ6ZV65 393 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TBC1D1Q86TI0 1168 aaPredicted RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF410Q86VK4 478 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CDR2LQ86X02 465 aaPredicted RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ECHDC2Q86YB7 292 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ZDHHC17Q8IUH5 632 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 UNC45BQ8IWX7 931 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM192Q8IY95 271 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 C7orf61Q8IZ16 206 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 KIAA0319LQ8IZA0 1049 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 C4orf33Q8N1A6 199 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TOP6BLQ8N6T0 577 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 EMC1Q8N766 993 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms