RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MS4A14Q96JA4 679 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SLC2A11Q9BYW1 496 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 KLC2Q9H0B6 622 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SLC2A4RGQ9NR83 387 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 SORCS3Q9UPU3 1222 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 TBC1D30Q9Y2I9 924 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 NCOR1O75376 2440 aa16.62■□□□□ 0.25
VHL-203ENST00000477538 TGM2P21980 687 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 PFKPQ01813 784 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 CCDC181Q5TID7 509 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 NPNTQ6UXI9 565 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 ETFBKMTQ8IXQ9 262 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 OR52K2Q8NGK3 314 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 CELF6Q96J87 481 aaKnown RBP16.61■□□□□ 0.25
VHL-203ENST00000477538 CAPZA3Q96KX2 299 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 NOL6Q9H6R4 1146 aaKnown RBP16.61■□□□□ 0.25
VHL-203ENST00000477538 DNAJC17Q9NVM6 304 aaKnown RBP16.61■□□□□ 0.25
VHL-203ENST00000477538 KIAA1522Q9P206 1035 aaPredicted RBP16.61■□□□□ 0.25
VHL-203ENST00000477538 DUSP12Q9UNI6 340 aa16.61■□□□□ 0.25
VHL-203ENST00000477538 MUC22E2RYF6 1773 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 TCRBV7S2A1N4TA0A589 114 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ILVBLA1L0T0 632 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 APOC4-APOC2K7ER74 178 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 RAMP2O60895 175 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 TULP3O75386 442 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 URI1O94763 535 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 APOC2P02655 101 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 HLA-FP30511 346 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 OPRD1P41143 372 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 SOX9P48436 509 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 DGKGP49619 791 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 NDST2P52849 883 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 OXCT1P55809 520 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 YBEYP58557 167 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 GNA12Q03113 381 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 GBE1Q04446 702 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 LMAN2Q12907 356 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 KLF1Q13351 362 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 POLD3Q15054 466 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 RNF219Q5W0B1 726 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 AFMIDQ63HM1 303 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 ZNF783Q6ZMS7 281 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ADAT2Q7Z6V5 191 aaKnown RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 RNF135Q8IUD6 432 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ARHGAP12Q8IWW6 846 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 NETO2Q8NC67 525 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 MAIP1Q8WWC4 291 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 HAUS1Q96CS2 278 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 CHFRQ96EP1 664 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 MUC3BQ9H195 1237 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 MAGEH1Q9H213 219 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 LRRC19Q9H756 370 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 HEBP1Q9NRV9 189 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 ABCB8Q9NUT2 735 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 FBXO10Q9UK96 956 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
VHL-203ENST00000477538 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
VHL-203ENST00000477538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 RASA4BC9J798 803 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 SPECC1L-ADORA2AF8WAN1 911 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 RASA4O43374 803 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 PECAM1P16284 738 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 CD70P32970 193 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 ETFBP38117 255 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 EIF2DP41214 584 aaKnown RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 CSKP41240 450 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 SLC6A11P48066 632 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 KDSRQ06136 332 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 SLC10A2Q12908 348 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 SLC12A1Q13621 1099 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 PARP15Q460N3 678 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 GRAMD4Q6IC98 578 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.59■□□□□ 0.25
VHL-203ENST00000477538 TP53INP2Q8IXH6 220 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 GJD3Q8N144 294 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 OR7D4Q8NG98 312 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 P3H4Q92791 437 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 LMLNQ96KR4 655 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 SLC39A8Q9C0K1 460 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 DTLQ9NZJ0 730 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 DEC1Q9P2X7 70 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 SAE1Q9UBE0 346 aaPredicted RBP16.59■□□□□ 0.25
VHL-203ENST00000477538 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 PIAS3Q9Y6X2 628 aa16.59■□□□□ 0.25
VHL-203ENST00000477538 A0A0D9SEW6 157 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 ARHGAP42A6NI28 874 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 DFFAO00273 331 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 TRIM24O15164 1050 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 MAP3K6O95382 1288 aa16.58■□□□□ 0.24
VHL-203ENST00000477538 CISD3P0C7P0 127 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms