RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ST7Q9NRC1 585 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 TJP2Q9UDY2 1190 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SLCO3A1Q9UIG8 710 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 STOML2Q9UJZ1 356 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CA5BQ9Y2D0 317 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 PCDHB4Q9Y5E5 795 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 PCDHB1Q9Y5F3 818 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 ASH1LQ9NR48 2969 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TRPM6Q9BX84 2022 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SYNJ2BP-COX16A0A087WUM0 186 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 A0A1W2PR77 199 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TARSL2A2RTX5 802 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CETN3O15182 167 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 KLK10O43240 276 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SIGLEC6O43699 453 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 RTN2O75298 545 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 USP12O75317 370 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MT-CO3P00414 261 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CALCAP01258 141 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MYL1P05976 194 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 PDGFRAP16234 1089 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MZF1P28698 734 aaPredicted RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 GABREP78334 506 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TLE3Q04726 772 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 ILKQ13418 452 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 LY6DQ14210 128 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 ELAVL3Q14576 367 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CBWD6Q4V339 395 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SETMARQ53H47 684 aaPredicted RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 DCAF6Q58WW2 860 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MS4A13Q5J8X5 152 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CBWD3Q5JTY5 395 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CBWD5Q5RIA9 395 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MSANTD2Q6P1R3 559 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 FOXR1Q6PIV2 292 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TMEM270Q6UE05 265 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 DSG4Q86SJ6 1040 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CIR1Q86X95 450 aaPredicted RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SPATS2Q86XZ4 545 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SMYD4Q8IYR2 804 aaPredicted RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MFSD2AQ8NA29 543 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TMEM174Q8WUU8 243 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 KCNE4Q8WWG9 221 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 OR8D1Q8WZ84 308 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TSC1Q92574 1164 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 RNF34Q969K3 372 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 MYEOVQ96EZ4 313 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 KLHDC7BQ96G42 594 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SPATA32Q96LK8 384 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 TSG101Q99816 390 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 ABCG4Q9H172 646 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SYNDIG1Q9H7V2 258 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 COX16Q9P0S2 106 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 USP25Q9UHP3 1055 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC25A13Q9UJS0 675 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 INTS6Q9UL03 887 aaKnown RBP6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 NAALADL1Q9UQQ1 740 aa6.9□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF462Q96JM2 2506 aa6.9□□□□□ -1.31
RTFDC1-206ENST00000477485 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 KALRNO60229 2985 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 CAPN8A6NHC0 703 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 F5H5T6 163 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ERVH48-1M5A8F1 160 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 O00370 1275 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TRIM38O00635 465 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC31A1O15431 190 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 CSO75390 466 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 IGLV3-27P01718 113 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 THEGLP0DJG4 465 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ALPPL2P10696 532 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 MYF5P13349 255 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 KRT10P13645 584 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 PRLRP16471 622 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TACR2P21452 398 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TBXAS1P24557 533 aaPredicted RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ACP1P24666 158 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 DRD3P35462 400 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 NDUFA8P51970 172 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 METAP1P53582 386 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 E2F1Q01094 437 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 CNTN1Q12860 1018 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 NFIL3Q16649 462 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 PROX2Q3B8N5 592 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 C3orf38Q5JPI3 329 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 SFMBT2Q5VUG0 894 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM46CQ5VWP2 391 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 PMF1Q6P1K2 205 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 LCLAT1Q6UWP7 414 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 PRICKLE2Q7Z3G6 844 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TAC4Q86UU9 113 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ERICH1Q86X53 443 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms