RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 CYS1Q717R9 158 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SLC26A11Q86WA9 606 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 VPS52Q8N1B4 723 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 ZNF276Q8N554 614 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 DNAJC5GQ8N7S2 189 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
SYF2-204ENST00000476231 LGMNQ99538 433 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 BRD8Q9H0E9 1235 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 TXLNGQ9NUQ3 528 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 TLR6Q9Y2C9 796 aa19.56■□□□□ 0.72
SYF2-204ENST00000476231 SOAT2O75908 522 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 IL1BP01584 269 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 C1QAP02745 245 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 CSF2RAP15509 400 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 ITGB8P26012 769 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 EPHB2P29323 1055 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 LGSNQ5TDP6 509 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 CCDC33Q8N5R6 958 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 TCP10LQ8TDR4 215 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 ZNF558Q96NG5 402 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 VN1R3Q9BXE9 311 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 PRDM12Q9H4Q4 367 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 PRDM5Q9NQX1 630 aaPredicted RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 TLR8Q9NR97 1041 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 OLA1Q9NTK5 396 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 SNX10Q9Y5X0 201 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 A0A0A0MRY4 1105 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 WDR27A2RRH5 827 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 MSI1O43347 362 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 UNC5CO95185 931 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 SOD2P04179 222 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 SLC2A3P11169 496 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 RAG1P15918 1043 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 NEK3P51956 506 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 AP1B1Q10567 949 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 KBTBD12Q3ZCT8 623 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 TTC39BQ5VTQ0 682 aaPredicted RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 KIAA1841Q6NSI8 718 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 CMTR2Q8IYT2 770 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 TMEM199Q8N511 208 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 GPR152Q8TDT2 470 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 KLHL29Q96CT2 875 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 MRRFQ96E11 262 aaKnown RBP19.55■□□□□ 0.72
SYF2-204ENST00000476231 P2RY11Q96G91 374 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 APOPT1Q96IL0 206 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 SPATA13Q96N96 652 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 ETNK1Q9HBU6 452 aa19.55■□□□□ 0.72
SYF2-204ENST00000476231 KCNU1A8MYU2 1149 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 PAGE1O75459 146 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 MX2P20592 715 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 WDR5P61964 334 aaKnown RBP19.54■□□□□ 0.72
SYF2-204ENST00000476231 DEFB103AP81534 67 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 CDK16Q00536 496 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 ANKRD20A2Q5SQ80 823 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 ANKRD20A1Q5TYW2 823 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 ANKRD20A3Q5VUR7 823 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 FYB2Q5VWT5 728 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 TBC1D1Q86TI0 1168 aaPredicted RBP19.54■□□□□ 0.72
SYF2-204ENST00000476231 CAND1Q86VP6 1230 aaKnown RBP19.54■□□□□ 0.72
SYF2-204ENST00000476231 SLC39A11Q8N1S5 342 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 CCNYQ8ND76 341 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 C10orf82Q8WW14 230 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 XAB2Q9HCS7 855 aaKnown RBP19.54■□□□□ 0.72
SYF2-204ENST00000476231 NUDT5Q9UKK9 219 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 TTLL3Q9Y4R7 772 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 GREB1Q4ZG55 1949 aa19.54■□□□□ 0.72
SYF2-204ENST00000476231 C2CD2LO14523 706 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 OPHN1O60890 802 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 ATP6V1G2O95670 118 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 LAG3P18627 525 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 HOXC13P31276 330 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 OR1D2P34982 312 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 FDFT1P37268 417 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 TUFMP49411 452 aaKnown RBP19.53■□□□□ 0.72
SYF2-204ENST00000476231 NRG1Q02297 640 aaPredicted RBP19.53■□□□□ 0.72
SYF2-204ENST00000476231 TAF10Q12962 218 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 LRRC6Q86X45 466 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 MTBPQ96DY7 904 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 SLC39A13Q96H72 371 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 TMEM169Q96HH4 297 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 LRRC37BQ96QE4 947 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 SIK2Q9H0K1 926 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 SLCO1B3Q9NPD5 702 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.53■□□□□ 0.72
SYF2-204ENST00000476231 MKS1Q9NXB0 559 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 RNF103O00237 685 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 FGF10O15520 208 aaPredicted RBP19.53■□□□□ 0.72
SYF2-204ENST00000476231 ADAM12O43184 909 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 LPXNO60711 386 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 KRT37O76014 449 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 BAIAP3O94812 1187 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 TGDSO95455 350 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 METTL18O95568 372 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 APRTP07741 180 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 ETV4P43268 484 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 PPIDQ08752 370 aaKnown RBP19.53■□□□□ 0.72
SYF2-204ENST00000476231 SEMA5AQ13591 1074 aa19.53■□□□□ 0.72
SYF2-204ENST00000476231 BTG3Q14201 252 aaPredicted RBP19.53■□□□□ 0.72
SYF2-204ENST00000476231 MANEALQ5VSG8 457 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms