RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RMND1Q9NWS8 449 aa14.47□□□□□ -0.09
CCDC78-209ENST00000474647 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
CCDC78-209ENST00000474647 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
CCDC78-209ENST00000474647 SLCO3A1Q9UIG8 710 aa14.47□□□□□ -0.09
CCDC78-209ENST00000474647 NAALADL1Q9UQQ1 740 aa14.47□□□□□ -0.09
CCDC78-209ENST00000474647 A0A1W2PQ27 194 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 A0A1W2PQ64 194 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 TLR4O00206 839 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 CAPN9O14815 690 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 RRP8O43159 456 aaKnown RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 FYNP06241 537 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 C1SP09871 688 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 CDK4P11802 303 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 VAV1P15498 845 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 MZF1P28698 734 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 MAT2AP31153 395 aaKnown RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 NNMTP40261 264 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 EIF2S3P41091 472 aaKnown RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 FMO5P49326 533 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 PMS1P54277 932 aaKnown RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 NXPH1P58417 271 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 ARID5BQ14865 1188 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 STILQ15468 1287 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 CNGA2Q16280 664 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 ZNF658Q5TYW1 1059 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 KDM1BQ8NB78 822 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 PTPRN2Q92932 1015 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 KAT5Q92993 513 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 HSFY1Q96LI6 401 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 FCRL3Q96P31 734 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 FAM129BQ96TA1 746 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 SCAND2PQ9GZW5 306 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-209ENST00000474647 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.09
CCDC78-209ENST00000474647 SDC3O75056 442 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 PDGFRAP16234 1089 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 TACR2P21452 398 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 METAP1P53582 386 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 C19orf57Q0VDD7 668 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 NNTQ13423 1086 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 ELAVL3Q14576 367 aaKnown RBP14.45□□□□□ -0.1
CCDC78-209ENST00000474647 CCDC40Q4G0X9 1142 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 NAPEPLDQ6IQ20 393 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 TENM4Q6N022 2769 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 FBXL19Q6PCT2 694 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 RRAGAQ7L523 313 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
CCDC78-209ENST00000474647 CIR1Q86X95 450 aaPredicted RBP14.45□□□□□ -0.1
CCDC78-209ENST00000474647 OXR1Q8N573 874 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 SLC39A7Q92504 469 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 BAP1Q92560 729 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 SLC39A13Q96H72 371 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
CCDC78-209ENST00000474647 F5H5T6 163 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 RTN2O75298 545 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 DRD3P35462 400 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 LRRC63Q05C16 580 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 POM121L1PQ3SYA9 428 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 ACCSLQ4AC99 568 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 ZC3H12AQ5D1E8 599 aaKnown RBP14.44□□□□□ -0.1
CCDC78-209ENST00000474647 SYPL2Q5VXT5 272 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 SPATS2Q86XZ4 545 aaKnown RBP14.44□□□□□ -0.1
CCDC78-209ENST00000474647 ERCC4Q92889 916 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-209ENST00000474647 NRSN2Q9GZP1 204 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 RAI2Q9Y5P3 530 aa14.44□□□□□ -0.1
CCDC78-209ENST00000474647 CFAP46Q8IYW2 2715 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 ASH1LQ9NR48 2969 aaKnown RBP14.43□□□□□ -0.1
CCDC78-209ENST00000474647 SYNJ2BP-COX16A0A087WUM0 186 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 SART1O43290 800 aaKnown RBP14.43□□□□□ -0.1
CCDC78-209ENST00000474647 LATO43561 262 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 BRINP1O60477 761 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 KRT5P13647 590 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 GLDCP23378 1020 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 CETN1Q12798 172 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 KIF26BQ2KJY2 2108 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 SFMBT2Q5VUG0 894 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 DSG4Q86SJ6 1040 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 ARHGEF19Q8IW93 802 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
CCDC78-209ENST00000474647 MFSD2AQ8NA29 543 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 TSC1Q92574 1164 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 BTN2A3PQ96KV6 586 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 SPAG5Q96R06 1193 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 MYOCQ99972 504 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 PRORYQ9H606 182 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 FAM204AQ9H8W3 233 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 ERVMER34-1Q9H9K5 563 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
CCDC78-209ENST00000474647 COX16Q9P0S2 106 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 CYTH4Q9UIA0 394 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 SLC25A13Q9UJS0 675 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 TPX2Q9ULW0 747 aaKnown RBP14.43□□□□□ -0.1
CCDC78-209ENST00000474647 CLCA2Q9UQC9 943 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 ATP6V1DQ9Y5K8 247 aa14.43□□□□□ -0.1
CCDC78-209ENST00000474647 COL27A1Q8IZC6 1860 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-209ENST00000474647 ATXN7O15265 892 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-209ENST00000474647 PLRG1O43660 514 aaKnown RBP14.42□□□□□ -0.1
CCDC78-209ENST00000474647 BNIP3LO60238 219 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms