RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 CHRDQ9H2X0 955 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 CATSPERBQ9H7T0 1116 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 PCDH18Q9HCL0 1135 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 NDFIP2Q9NV92 336 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 TMEM248Q9NWD8 314 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 DNAI1Q9UI46 699 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 PPP2R2CQ9Y2T4 447 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 STARD13Q9Y3M8 1113 aa18.63■□□□□ 0.57
SNRPB-203ENST00000474384 ZDBF2Q9HCK1 2354 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 H3BRJ5 948 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 TIMM44O43615 452 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 KRT86O43790 486 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 CD48P09326 243 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
SNRPB-203ENST00000474384 POLR2EP19388 210 aaKnown RBP18.62■□□□□ 0.57
SNRPB-203ENST00000474384 ARL4AP40617 200 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 MAGEA9P43362 315 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 HCAR3P49019 387 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 MAPKAPK2P49137 400 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 ARSEP51690 589 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 CDH6P55285 790 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 OXCT1P55809 520 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 MTAPQ13126 283 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 SLC12A1Q13621 1099 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 DMC1Q14565 340 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 IFI16Q16666 785 aaKnown RBP18.62■□□□□ 0.57
SNRPB-203ENST00000474384 PLEKHG6Q3KR16 790 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 EGFLAMQ63HQ2 1017 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 RFX8Q6ZV50 586 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 POLNQ7Z5Q5 900 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 RHOT1Q8IXI2 618 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 ALLCQ8N6M5 410 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 ZNF513Q8N8E2 541 aaPredicted RBP18.62■□□□□ 0.57
SNRPB-203ENST00000474384 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
SNRPB-203ENST00000474384 FAM71BQ8TC56 605 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 ALG14Q96F25 216 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 FEM1AQ9BSK4 669 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 MUC3BQ9H195 1237 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 RETREG1Q9H6L5 497 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
SNRPB-203ENST00000474384 A0A0D9SEW6 157 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 GRID2IPA4D2P6 1211 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 FGF10O15520 208 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 KLF8O95600 359 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 IL4RP24394 825 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 ZNF135P52742 658 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 PLK1P53350 603 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 MRPS21P82921 87 aaKnown RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 MMRN1Q13201 1228 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 EIF4HQ15056 248 aaKnown RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 LRRC38Q5VT99 294 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 CCDC33Q8N5R6 958 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
SNRPB-203ENST00000474384 LRRC57Q8N9N7 239 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 IL17RCQ8NAC3 791 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 KCNV2Q8TDN2 545 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 CYB5D2Q8WUJ1 264 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 UCMAQ8WVF2 138 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 RAPGEF5Q92565 580 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 TTC17Q96AE7 1141 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 CSPG4P5Q96PW8 444 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 ACOX2Q99424 681 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 LZTFL1Q9NQ48 299 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 VPS28Q9UK41 221 aa18.61■□□□□ 0.57
SNRPB-203ENST00000474384 ILVBLA1L0T0 632 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 WASH4PA8MWX3 477 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 ATG13O75143 517 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 PALMO75781 387 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 ATP5BP06576 529 aaKnown RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 ERCC2P18074 760 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 AMPD1P23109 780 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 WASP42768 502 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 CTSOP43234 321 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 DPYSQ14117 519 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 DPYSL3Q14195 570 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 PDK2Q15119 407 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 ZNF662Q6ZS27 426 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 SPEM1Q8N4L4 309 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 DTWD2Q8NBA8 298 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 TXNDC5Q8NBS9 432 aaKnown RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 OR7D4Q8NG98 312 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 TSC1Q92574 1164 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 SPON2Q9BUD6 331 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 CALN1Q9BXU9 219 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 POLR3BQ9NW08 1133 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 SPATA6Q9NWH7 488 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 C2orf42Q9NWW7 574 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 THAP10Q9P2Z0 257 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-203ENST00000474384 OR51B4Q9Y5P0 310 aa18.6■□□□□ 0.57
SNRPB-203ENST00000474384 CHURC1-FNTBB4DL54 471 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 DLDP09622 509 aaKnown RBP18.59■□□□□ 0.57
SNRPB-203ENST00000474384 HNRNPLP14866 589 aaKnown RBP eCLIP18.59■□□□□ 0.57
SNRPB-203ENST00000474384 KDELR1P24390 212 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 ACVRL1P37023 503 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 GNA12Q03113 381 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 ZNF234Q14588 700 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 PTPRNQ16849 979 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 ZNF783Q6ZMS7 281 aa18.59■□□□□ 0.57
SNRPB-203ENST00000474384 MAP7D3Q8IWC1 876 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms