RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CTSOP43234 321 aaPredicted RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 PLK1P53350 603 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 HDAC4P56524 1084 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 KRT83P78385 493 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 RPL6Q02878 288 aaKnown RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 MAMLD1Q13495 774 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 CAMK2GQ13555 558 aaPredicted RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 ACCSLQ4AC99 568 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 ALFQ53S48 1182 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 PMS2CLQ68D20 193 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 CXorf57Q6NSI4 855 aaKnown RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 TMC6Q7Z403 805 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 DNAAF5Q86Y56 855 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 TMEFF1Q8IYR6 380 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 FEM1AQ9BSK4 669 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 ZYG11BQ9C0D3 744 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 MKRN2Q9H000 416 aaKnown RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 FBRSQ9HAH7 460 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 CD248Q9HCU0 757 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 MRPL47Q9HD33 250 aaKnown RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 PCDHGA5Q9Y5G8 931 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 SCINQ9Y6U3 715 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 EP300Q09472 2414 aaPredicted RBP14.62□□□□□ -0.07
VAMP4-203ENST00000474047 THADAQ6YHU6 1953 aa14.62□□□□□ -0.07
VAMP4-203ENST00000474047 TCRBV5S1A1TA0A578 114 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 DRGXA6NNA5 263 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 EPN2O95208 641 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 PLEKP08567 350 aaPredicted RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 EFHC2Q5JST6 749 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 PLEKHA7Q6IQ23 1121 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 CYP2U1Q7Z449 544 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 SETD3Q86TU7 594 aaPredicted RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 KDM1BQ8NB78 822 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 TRIM5Q9C035 493 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 OSBPL2Q9H1P3 480 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 PRSS16Q9NQE7 514 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 SEMA4GQ9NTN9 838 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 SLCO3A1Q9UIG8 710 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 MBD1Q9UIS9 605 aaPredicted RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 TBC1D30Q9Y2I9 924 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 ABCA7Q8IZY2 2146 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 TTC34A8MYJ7 566 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 RNF8O76064 485 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 DNTTP04053 509 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 CCDC6Q16204 474 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 PPP1R15BQ5SWA1 713 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 HGSNATQ68CP4 663 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 ARMCX6Q7L4S7 300 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 METTL3Q86U44 580 aaKnown RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 DRC7Q8IY82 874 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 ZNF683Q8IZ20 524 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 DEFB119Q8N690 84 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 C12orf50Q8NA57 414 aaPredicted RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 OR8K1Q8NGG5 319 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 GANCQ8TET4 914 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 MRGPRX3Q96LB0 322 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 DEF6Q9H4E7 631 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 MTG2Q9H4K7 406 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 ITM2CQ9NQX7 267 aa14.61□□□□□ -0.07
VAMP4-203ENST00000474047 PPARGC1AQ9UBK2 798 aaKnown RBP14.61□□□□□ -0.07
VAMP4-203ENST00000474047 GPR179Q6PRD1 2367 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 VPS13AQ96RL7 3174 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 OTOGLQ3ZCN5 2332 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 IGLV3-10A0A075B6K4 115 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 IGHV1OR15-9A0A0B4J2B8 117 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 EDDM13A0A1B0GTR0 161 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 FOXD2O60548 495 aaPredicted RBP14.6□□□□□ -0.07
VAMP4-203ENST00000474047 CD6P30203 668 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 OXTRP30559 389 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 MPLP40238 635 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 STK19P49842 368 aaPredicted RBP14.6□□□□□ -0.07
VAMP4-203ENST00000474047 COPAP53621 1224 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 CSRP2Q16527 193 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 HNRNPA1L2Q32P51 320 aaKnown RBP14.6□□□□□ -0.07
VAMP4-203ENST00000474047 CCDC122Q5T0U0 273 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 ZNF776Q68DI1 518 aaPredicted RBP14.6□□□□□ -0.07
VAMP4-203ENST00000474047 FAM124AQ86V42 546 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 PIGKQ92643 395 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 NTAN1Q96AB6 310 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 SPON2Q9BUD6 331 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 ISCUQ9H1K1 167 aa14.6□□□□□ -0.07
VAMP4-203ENST00000474047 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
VAMP4-203ENST00000474047 TMEM191CA6NGB0 347 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 SIN3BO75182 1162 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 EIF4A3P38919 411 aaKnown RBP14.59□□□□□ -0.07
VAMP4-203ENST00000474047 TPMTP51580 245 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 AIF1P55008 147 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 LMNB2Q03252 620 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 SFSWAPQ12872 951 aaKnown RBP14.59□□□□□ -0.07
VAMP4-203ENST00000474047 TTC31Q49AM3 519 aaPredicted RBP14.59□□□□□ -0.07
VAMP4-203ENST00000474047 SPDYCQ5MJ68 293 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 LYSMD4Q5XG99 296 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 ALKBH5Q6P6C2 394 aaKnown RBP14.59□□□□□ -0.07
VAMP4-203ENST00000474047 OR52K2Q8NGK3 314 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 TBC1D31Q96DN5 1066 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 TOE1Q96GM8 510 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms