RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 A0A0A6YYK5 440 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 H0Y858 1186 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 FGF10O15520 208 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 RARAP10276 462 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 HOXB2P14652 356 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 TCF4P15884 667 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 MAN1A1P33908 653 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 HTR7P34969 479 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 ARL4AP40617 200 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 MAPKAPK2P49137 400 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 VAV2P52735 878 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 ECT2LQ008S8 904 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 SULT2A1Q06520 285 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 KRT81Q14533 505 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 TCEAL1Q15170 157 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 CRY1Q16526 586 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 SERPINA13PQ6UXR4 307 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 CYP4V2Q6ZWL3 525 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 OR52K2Q8NGK3 314 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 TEKT4Q8WW24 435 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 FEM1AQ9BSK4 669 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 DESI2Q9BSY9 194 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 POLMQ9NP87 494 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDX56-209ENST00000473924 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 TMEM248Q9NWD8 314 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 C2orf42Q9NWW7 574 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 DONSONQ9NYP3 566 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 HCN2Q9UL51 889 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 REXO2Q9Y3B8 237 aaKnown RBP12.75□□□□□ -0.37
DDX56-209ENST00000473924 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
DDX56-209ENST00000473924 ZNF318Q5VUA4 2279 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 WASH3PC4AMC7 463 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 SPOPO43791 374 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 SYNCRIPO60506 623 aaKnown RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 ADAM23O75077 832 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 EPHX1P07099 455 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 KRT7P08729 469 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 GOT1P17174 413 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ETFBP38117 255 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 NNMTP40261 264 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 IL12RB1P42701 662 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 SLC1A1P43005 524 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 DGKEP52429 567 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 PLK1P53350 603 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 PTPN5P54829 565 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 NRLP54845 237 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 HADHBP55084 474 aaKnown RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 KIF5AQ12840 1032 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 STARD3Q14849 445 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 DPYSL2Q16555 572 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 IL31Q6EBC2 164 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 TXNRD3NBQ6F5E7 133 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ZNF783Q6ZMS7 281 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 NLRP14Q86W24 1093 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ZNF354CQ86Y25 554 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 CPNE8Q86YQ8 564 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 RTL3Q8N8U3 475 aaKnown RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 ERLEC1Q96DZ1 483 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 HHIPQ96QV1 700 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 SPON2Q9BUD6 331 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
DDX56-209ENST00000473924 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 SLC25A13Q9UJS0 675 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 NEU3Q9UQ49 428 aa12.74□□□□□ -0.37
DDX56-209ENST00000473924 DOCK4Q8N1I0 1966 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 RCCD1A6NED2 376 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 H3BRJ5 948 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 K7ESF4 209 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 BUB1O43683 1085 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 RAMP2O60895 175 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 APBB3O95704 486 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 SP9P0CG40 484 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms