RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 NR1H2P55055 460 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 VSX2P58304 361 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NECTIN1Q15223 517 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZBTB6Q15916 424 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 LHFPL3Q86UP9 236 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 TBCKQ8TEA7 893 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NSMCE2Q96MF7 247 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RNF145Q96MT1 663 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZNF577Q9BSK1 485 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZNF350Q9GZX5 532 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 WWP1Q9H0M0 922 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 TAF1DQ9H5J8 278 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MTMR10Q9NXD2 777 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZSWIM5Q9P217 1185 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PPIEQ9UNP9 301 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PCDHB6Q9Y5E3 794 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 LRRC7Q96NW7 1537 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 POLR1AO95602 1720 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PER2O15055 1255 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CPP00450 1065 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 DGKAP23743 735 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 LSP1P33241 339 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RAB5CP51148 216 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MAD2L1BPQ15013 274 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ARHGAP11BQ3KRB8 267 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 FAM160B1Q5W0V3 765 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 AFMIDQ63HM1 303 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 KANSL1Q7Z3B3 1105 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PALB2Q86YC2 1186 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 IRGQQ8WZA9 623 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MUL1Q969V5 352 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CD300AQ9UGN4 299 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ACSL6Q9UKU0 697 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 HEATR9A2RTY3 570 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RAD17O75943 681 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 DHFRP00374 187 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NR2F2P24468 414 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CCND2P30279 289 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 VLDLRP98155 873 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 KRT33BQ14525 404 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CHRNA6Q15825 494 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RASGRP2Q7LDG7 609 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZNF321PQ8N8H1 164 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 POMGNT2Q8NAT1 580 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 TDRD5Q8NAT2 981 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NR4A3Q92570 626 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CIPCQ9C0C6 399 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NARFQ9UHQ1 456 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 C21orf2O43822 256 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 FKBP6O75344 327 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ELFN1P0C7U0 828 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CDC25AP30304 524 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 NT5C2P49902 561 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 GSCP56915 257 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 EIF5AP63241 154 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 GRAPQ13588 217 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 UBE2SQ16763 222 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MLIPQ5VWP3 458 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ANKS3Q6ZW76 656 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MTSS1LQ765P7 747 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 CFAP206Q8IYR0 622 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 DPP10Q8N608 796 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ASCC1Q8N9N2 400 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 TSTD1Q8NFU3 115 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 OR7G2Q8NG99 324 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 GRAPLQ8TC17 118 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 KBTBD7Q8WVZ9 684 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 AK8Q96MA6 479 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 Q96MT0 163 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 OSBPL6Q9BZF3 934 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 SUGCTQ9HAC7 445 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PDGFCQ9NRA1 345 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 PCDHGB3Q9Y5G1 929 aa8.37□□□□□ -1.07
CDK5RAP2-209ENST00000473282 USP17L3A6NCW0 530 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 USP17L4A6NCW7 530 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ZNF35P13682 527 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 ALDH3A2P51648 485 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 VSNL1P62760 191 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 DDR1Q08345 913 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 KIF19Q2TAC6 998 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 RBM44Q6ZP01 1051 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 USP17L1Q7RTZ2 530 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 OXR1Q8N573 874 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 OR6J1Q8NGC5 347 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 HTRA1Q92743 480 aa8.36□□□□□ -1.07
CDK5RAP2-209ENST00000473282 COA7Q96BR5 231 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms