RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 CALCOCO2Q13137 446 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 ANKRD22Q5VYY1 191 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 ELMSAN1Q6PJG2 1045 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 Q6ZNB5 142 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 SH3RF2Q8TEC5 729 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 USP13Q92995 863 aaPredicted RBP12.92□□□□□ -0.34
PCCB-211ENST00000473073 ART4Q93070 314 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 HDAC11Q96DB2 347 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 CLUHO75153 1309 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 TCRBV7S3A2A0A539 114 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 CFAP69A5D8W1 941 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 WASH4PA8MWX3 477 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
PCCB-211ENST00000473073 FGF19O95750 216 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 CHKAP35790 457 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 PAPOLAP51003 745 aaKnown RBP12.92□□□□□ -0.34
PCCB-211ENST00000473073 MTM1Q13496 603 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 ATPAF2Q8N5M1 289 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 USP33Q8TEY7 942 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
PCCB-211ENST00000473073 FMO2Q99518 471 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 WHRNQ9P202 907 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 ANAPC5Q9UJX4 755 aa12.92□□□□□ -0.34
PCCB-211ENST00000473073 LSM7Q9UK45 103 aaKnown RBP12.92□□□□□ -0.34
PCCB-211ENST00000473073 METTL18O95568 372 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ITIH2P19823 946 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 MX2P20592 715 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ACTN2P35609 894 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ZBTB17Q13105 803 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 AFMIDQ63HM1 303 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 EP400NLQ6ZTU2 488 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 TPGS1Q6ZTW0 290 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 CCDC25Q86WR0 208 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCCB-211ENST00000473073 LEMD2Q8NC56 503 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 CCHCR1Q8TD31 782 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 CPT1BQ92523 772 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 PPP2R3CQ969Q6 453 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 AZIN2Q96A70 460 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ZNF419Q96HQ0 510 aaPredicted RBP12.91□□□□□ -0.34
PCCB-211ENST00000473073 CDCA3Q99618 268 aaPredicted RBP12.91□□□□□ -0.34
PCCB-211ENST00000473073 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
PCCB-211ENST00000473073 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 TDP1Q9NUW8 608 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 PLK2Q9NYY3 685 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
PCCB-211ENST00000473073 A0A0D9SEW6 157 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RASA4BC9J798 803 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 NCAM2O15394 837 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RASA4O43374 803 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 TBL1XO60907 577 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 PTPN3P26045 913 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 DDX6P26196 483 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCCB-211ENST00000473073 ACVRL1P37023 503 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RGS19P49795 217 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 GRIN2CQ14957 1233 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 HIBCHQ6NVY1 386 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 SYCE2Q6PIF2 218 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RHBDF2Q6PJF5 856 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 ARID3BQ8IVW6 561 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 CCDC13Q8IYE1 715 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ZNF567Q8N184 647 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 UMODL1-AS1Q8N2C9 162 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 LZTR1Q8N653 840 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 TSEN2Q8NCE0 465 aaKnown RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 AGAP3Q96P47 875 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 TPX2Q9ULW0 747 aaKnown RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 A0A0A0MRY4 1105 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 J3KR12 359 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ZNF197O14709 1029 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 MAFKO60675 156 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 RAMP2O60895 175 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 TMEM63AO94886 807 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 DLX2Q07687 328 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 MTA1Q13330 715 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 ACBD5Q5T8D3 534 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 EMBQ6PCB8 327 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ARHGEF18Q6ZSZ5 1173 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms