RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 COX16Q9P0S2 106 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 SERGEFQ9UGK8 458 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 ADAMTS1Q9UHI8 967 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 CEP83Q9Y592 693 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 PCDHB9Q9Y5E1 797 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 PCDHGB2Q9Y5G2 931 aa15.77■□□□□ 0.12
VTI1A-203ENST00000472892 ASPMQ8IZT6 3477 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NUMA1Q14980 2115 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 M0QYT0 321 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 MID1O15344 667 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 DAB1O75553 588 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 CYP11B1P15538 503 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 PDGFRAP16234 1089 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 SLC8A1P32418 973 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NNMTP40261 264 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 GABRB2P47870 512 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 GRIA4P48058 902 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 GALCP54803 685 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NME3Q13232 169 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 TEAD4Q15561 434 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 KIF19Q2TAC6 998 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 HSP90AA4PQ58FG1 418 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 CLEC17AQ6ZS10 378 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 RAB44Q7Z6P3 723 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 GLRX5Q86SX6 157 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 CIR1Q86X95 450 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 STK40Q8N2I9 435 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 TMEM35BQ8NCS4 154 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NT5C3BQ969T7 300 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 PPP1R9BQ96SB3 815 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NPY6RQ99463 290 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 NUP62CLQ9H1M0 184 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 RRN3Q9NYV6 651 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 PCOLCE2Q9UKZ9 415 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 FZD4Q9ULV1 537 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 ANKRD6Q9Y2G4 727 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 FNDC3AQ9Y2H6 1198 aaKnown RBP15.76■□□□□ 0.11
VTI1A-203ENST00000472892 MSRB2Q9Y3D2 182 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 HS3ST4Q9Y661 456 aa15.76■□□□□ 0.11
VTI1A-203ENST00000472892 A0A1W2PP55 124 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 PAGE1O75459 146 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 GOT1P17174 413 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 C5AR1P21730 350 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 EEF1GP26641 437 aaKnown RBP15.75■□□□□ 0.11
VTI1A-203ENST00000472892 CXCR3P49682 368 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 STK19P49842 368 aaPredicted RBP15.75■□□□□ 0.11
VTI1A-203ENST00000472892 RAPGEF1Q13905 1077 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 KCNJ12Q14500 433 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 TCP11X2Q5H9J9 407 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 OTUD1Q5VV17 481 aaPredicted RBP15.75■□□□□ 0.11
VTI1A-203ENST00000472892 C14orf80Q86SX3 495 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 FRS2Q8WU20 508 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 PGAP3Q96FM1 320 aaPredicted RBP15.75■□□□□ 0.11
VTI1A-203ENST00000472892 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 OMDQ99983 421 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 FEM1AQ9BSK4 669 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 PIGVQ9NUD9 493 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.75■□□□□ 0.11
VTI1A-203ENST00000472892 KLK13Q9UKR3 277 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 VANGL2Q9ULK5 521 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 TBC1D30Q9Y2I9 924 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 OR51B4Q9Y5P0 310 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 SNX11Q9Y5W9 270 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 FHOD1Q9Y613 1164 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 ZFHX4Q86UP3 3567 aa15.75■□□□□ 0.11
VTI1A-203ENST00000472892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 A0A1W2PPC4 97 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 TMEM8BA6NDV4 472 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 LRRC72A6NJI9 287 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 CLDN11O75508 207 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 RNASEH2AO75792 299 aaKnown RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 UCHL3P15374 230 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 SCNN1AP37088 669 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 IRAK1P51617 712 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 RACK1P63244 317 aaKnown RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 CENPCQ03188 943 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 ZNF177Q13360 481 aaPredicted RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 ELAVL3Q14576 367 aaKnown RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 SUZ12Q15022 739 aaKnown RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 KCNT1Q5JUK3 1230 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 NCEH1Q6PIU2 408 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 SND1Q7KZF4 910 aaKnown RBP eCLIP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 CHCHD4Q8N4Q1 142 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 AADATQ8N5Z0 425 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 OR52K2Q8NGK3 314 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 OR2T34Q8NGX1 318 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 BAHD1Q8TBE0 780 aaPredicted RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 SETD7Q8WTS6 366 aaKnown RBP15.74■□□□□ 0.11
VTI1A-203ENST00000472892 ADAMTS14Q8WXS8 1223 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 C18orf8Q96DM3 657 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 DCBLD2Q96PD2 775 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 STK33Q9BYT3 514 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 WDCPQ9H6R7 721 aa15.74■□□□□ 0.11
VTI1A-203ENST00000472892 EBF2Q9HAK2 575 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms