RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CA3P07451 260 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 TSHRP16473 764 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 HDCP19113 662 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PTPN3P26045 913 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 CORO1AP31146 461 aaKnown RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 KCNQ1P51787 676 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 NRLP54845 237 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 YBEYP58557 167 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 WASHC5Q12768 1159 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PRPSAP1Q14558 356 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 KRT71Q3SY84 523 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PARP15Q460N3 678 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 TEX44Q53QW1 395 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ANKRD22Q5VYY1 191 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ZNF567Q8N184 647 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PYROXD1Q8WU10 500 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 LRRC39Q96DD0 335 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 KLF16Q9BXK1 252 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 STMN4Q9H169 189 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PRO3102Q9H379 93 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 DNAJC17Q9NVM6 304 aaKnown RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ZNF510Q9Y2H8 683 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 NFS1Q9Y697 457 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 MYO18AQ92614 2054 aaKnown RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 A0A087WUV0 522 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 C2orf78A6NCI8 922 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 E7ESA3 106 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 KCNK1O00180 336 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PSMD3O43242 534 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 TMEM63AO94886 807 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 HNRNPA1P09651 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 DDX6P26196 483 aaKnown RBP eCLIP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ERVK-21P61565 698 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ZNF844Q08AG5 666 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 CBLBQ13191 982 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 KYNUQ16719 465 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 C5orf22Q49AR2 442 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ADGRF1Q5T601 910 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 AFMIDQ63HM1 303 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 DENND1CQ8IV53 801 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ARHGAP12Q8IWW6 846 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 LGI2Q8N0V4 545 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ATP11CQ8NB49 1132 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 LRRN4Q8WUT4 740 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 FATE1Q969F0 183 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 SLC39A8Q9C0K1 460 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 PPCSQ9HAB8 311 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 IL21Q9HBE4 155 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ZNF334Q9HCZ1 680 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-206ENST00000472815 NINJ2Q9NZG7 142 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 ZMYM5Q9UJ78 669 aa14.97□□□□□ -0.01
HIF3A-206ENST00000472815 TRAV19A0A0A6YYK7 116 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-206ENST00000472815 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-206ENST00000472815 A0A1W2PPC1 479 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 HMGB1P1B2RPK0 211 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-206ENST00000472815 H3BQF6 201 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 AP3B1O00203 1094 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 MATN3O15232 486 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 RAMP2O60895 175 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 SPAG6O75602 509 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 METTL18O95568 372 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 OLFM2O95897 454 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 CKMP06732 381 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 MLNP12872 115 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 CCNB1P14635 433 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 PTPN2P17706 415 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 DNAJB1P25685 340 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 OR1E1P30953 314 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 CDH4P55283 916 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 IFI35P80217 286 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-206ENST00000472815 SMAD3P84022 425 aaKnown RBP14.96□□□□□ -0.01
HIF3A-206ENST00000472815 GPM6BQ13491 265 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 STAT4Q14765 748 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 TFAP2DQ7Z6R9 452 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 TMEM150AQ86TG1 271 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 CORO1BQ9BR76 489 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 GBA3Q9H227 469 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 EPB41L4BQ9H329 900 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 ATXN3LQ9H3M9 355 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 MAN1C1Q9NR34 630 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 RSPH14Q9UHP6 348 aa14.96□□□□□ -0.01
HIF3A-206ENST00000472815 SOBPA7XYQ1 873 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 H3BNC9 293 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 GRM6O15303 877 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 MAFKO60675 156 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 CLDN11O75508 207 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 CSPG5O95196 566 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 IRF1P10914 325 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 ATP5DP30049 168 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 RENBPP51606 427 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 POLD3Q15054 466 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-206ENST00000472815 BBS9Q3SYG4 887 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 ARHGAP15Q53QZ3 475 aa14.95□□□□□ -0.02
HIF3A-206ENST00000472815 FAXCQ5TGI0 409 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms