RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SMTNL2Q2TAL5 461 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 PLEKHG6Q3KR16 790 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 PPP6R3Q5H9R7 873 aaPredicted RBP20.53■□□□□ 0.88
SF1-213ENST00000472725 FSCBQ5H9T9 825 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 RFX8Q6ZV50 586 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 ADIPOR2Q86V24 386 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 SPEM1Q8N4L4 309 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 KDM1BQ8NB78 822 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 KIAA1524Q8TCG1 905 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 HSPH1Q92598 858 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 MAGEB5Q9BZ81 275 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 PRDM16Q9HAZ2 1276 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 GPATCH2LQ9NWQ4 482 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.53■□□□□ 0.88
SF1-213ENST00000472725 CHD5Q8TDI0 1954 aa20.53■□□□□ 0.88
SF1-213ENST00000472725 FAM86C2PA6NEL3 165 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 DAPK3O43293 454 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 PI15O43692 258 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 DCNP07585 359 aaKnown RBP20.52■□□□□ 0.88
SF1-213ENST00000472725 VASPP50552 380 aaPredicted RBP20.52■□□□□ 0.88
SF1-213ENST00000472725 ARSEP51690 589 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 CDH6P55285 790 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 YBEYP58557 167 aaPredicted RBP20.52■□□□□ 0.88
SF1-213ENST00000472725 KRT81Q14533 505 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 PITRM1Q5JRX3 1037 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 MBLAC2Q68D91 279 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 TXNRD3NBQ6F5E7 133 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 LZTR1Q8N653 840 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 TMEM105Q8N8V8 129 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 TSC1Q92574 1164 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 ZNF670Q9BS34 389 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 FEM1AQ9BSK4 669 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 MAGEH1Q9H213 219 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 PCDH18Q9HCL0 1135 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 RBM12Q9NTZ6 932 aaKnown RBP20.52■□□□□ 0.88
SF1-213ENST00000472725 CWC15Q9P013 229 aaKnown RBP20.52■□□□□ 0.88
SF1-213ENST00000472725 PPP2R2CQ9Y2T4 447 aa20.52■□□□□ 0.88
SF1-213ENST00000472725 DLDP09622 509 aaKnown RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 CHRM1P11229 460 aaPredicted RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 GOT1P17174 413 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 CSKP41240 450 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 FUT11Q495W5 492 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 TMEM215Q68D42 235 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 SDE2Q6IQ49 451 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 TFAP2DQ7Z6R9 452 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 UMODL1-AS1Q8N2C9 162 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 ZNF513Q8N8E2 541 aaPredicted RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 LRRC57Q8N9N7 239 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 KCTD6Q8NC69 237 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 ALG14Q96F25 216 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 LRFN3Q9BTN0 628 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 C2orf49Q9BVC5 232 aaPredicted RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 CIPCQ9C0C6 399 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 THAP10Q9P2Z0 257 aaPredicted RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 INTS6Q9UL03 887 aaKnown RBP20.51■□□□□ 0.87
SF1-213ENST00000472725 PLA2G4CQ9UP65 541 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 OR51B4Q9Y5P0 310 aa20.51■□□□□ 0.87
SF1-213ENST00000472725 MYO18AQ92614 2054 aaKnown RBP20.5■□□□□ 0.87
SF1-213ENST00000472725 KMT2EQ8IZD2 1858 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 MACROD2A1Z1Q3 448 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 PAPSS2O95340 614 aaPredicted RBP20.5■□□□□ 0.87
SF1-213ENST00000472725 SRPRAP08240 638 aaKnown RBP20.5■□□□□ 0.87
SF1-213ENST00000472725 CCR3P51677 355 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 NDST2P52849 883 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 GNA12Q03113 381 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 ENPP2Q13822 863 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 DPYSQ14117 519 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 EOGTQ5NDL2 527 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 RNF219Q5W0B1 726 aaPredicted RBP20.5■□□□□ 0.87
SF1-213ENST00000472725 SYT13Q7L8C5 426 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 CPNE8Q86YQ8 564 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 DCAF4L2Q8NA75 395 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 RPLP0P6Q8NHW5 317 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 CSPG4P5Q96PW8 444 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 MUC3BQ9H195 1237 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 KCNF1Q9H3M0 494 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 VPS28Q9UK41 221 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 MMP17Q9ULZ9 603 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 CUL9Q8IWT3 2517 aa20.5■□□□□ 0.87
SF1-213ENST00000472725 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 GRID2IPA4D2P6 1211 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 ZSCAN12O43309 604 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 RAMP2O60895 175 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 ERCC2P18074 760 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 MZF1P28698 734 aaPredicted RBP20.49■□□□□ 0.87
SF1-213ENST00000472725 NTSR1P30989 418 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 TIE1P35590 1138 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 DPYSL3Q14195 570 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 PARP15Q460N3 678 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 C2orf27AQ580R0 203 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 ODF2Q5BJF6 829 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 ZFYVE27Q5T4F4 411 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 SFTPA1Q8IWL2 248 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 IL17RCQ8NAC3 791 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 DTWD2Q8NBA8 298 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 FAF2Q96CS3 445 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 PRRX2Q99811 253 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 TRIM10Q9UDY6 481 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 GUCA1BQ9UMX6 200 aa20.49■□□□□ 0.87
SF1-213ENST00000472725 MIF4GDA9UHW6 222 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms