RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ME3Q16798 604 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 RNF219Q5W0B1 726 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-209ENST00000472116 ACOT1Q86TX2 421 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 TRIM69Q86WT6 500 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 HEATR4Q86WZ0 1026 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 ARHGAP18Q8N392 663 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 CGRRF1Q99675 332 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 MYOCQ99972 504 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 CBWD1Q9BRT8 395 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 SRRTQ9BXP5 876 aaKnown RBP10.63□□□□□ -0.71
CDHR3-209ENST00000472116 ARHGAP20Q9P2F6 1191 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 SALL4Q9UJQ4 1053 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 CA5BQ9Y2D0 317 aa10.63□□□□□ -0.71
CDHR3-209ENST00000472116 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-209ENST00000472116 TYW5A2RUC4 315 aaKnown RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 PHACTR2O75167 634 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 PPP1R37O75864 691 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 MOCS3O95396 460 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 DDAH2O95865 285 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 GAP43P17677 238 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 CD82P27701 267 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 ADORA2BP29275 332 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 AKT2P31751 481 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 ATICP31939 592 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 NOS2P35228 1153 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 NNMTP40261 264 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 ALCAMQ13740 583 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 GPRIN1Q7Z2K8 1008 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 MAMDC2Q7Z304 686 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 KIAA0907Q7Z7F0 614 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 DCP2Q8IU60 420 aaKnown RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 FAM217AQ8IXS0 508 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 FAM184AQ8NB25 1140 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 KDM1BQ8NB78 822 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 LARP4BQ92615 738 aaKnown RBP10.62□□□□□ -0.71
CDHR3-209ENST00000472116 RAD54LQ92698 747 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 PNPLA8Q9NP80 782 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 CSNK1G3Q9Y6M4 447 aa10.62□□□□□ -0.71
CDHR3-209ENST00000472116 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 HIVEP3Q5T1R4 2406 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 C10orf142B7Z368 130 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SLC31A1O15431 190 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 PLRG1O43660 514 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 KIF20AO95235 890 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SRPRAP08240 638 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 KRT7P08729 469 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 MZF1P28698 734 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 CD70P32970 193 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 KCNA1Q09470 495 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ELAVL3Q14576 367 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ARID5BQ14865 1188 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 LACTB2Q53H82 288 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ZNF542PQ5EBM4 170 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ZNF667Q5HYK9 610 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 C9orf64Q5T6V5 341 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 FAM46CQ5VWP2 391 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ZFAND4Q86XD8 727 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 MFN1Q8IWA4 741 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ZC3H3Q8IXZ2 948 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 STK40Q8N2I9 435 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 ZNF548Q8NEK5 533 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 FBXO18Q8NFZ0 1043 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 AK8Q96MA6 479 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 CCDC3Q9BQI4 270 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 DNAI2Q9GZS0 605 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SMYD3Q9H7B4 428 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 KIAA1586Q9HCI6 787 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 FAM49BQ9NUQ9 324 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 TBC1D7Q9P0N9 293 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 IPO11Q9UI26 975 aaKnown RBP10.61□□□□□ -0.71
CDHR3-209ENST00000472116 SVILO95425 2214 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 CELSR2Q9HCU4 2923 aa10.61□□□□□ -0.71
CDHR3-209ENST00000472116 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 PRAMEF33A0A0G2JMD5 474 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 A0A1W2PQ27 194 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 A0A1W2PQ64 194 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 A0A1W2PQC6 194 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 A6NNZ2 444 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 AQP9O43315 295 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 STX6O43752 255 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 PRAMEF10O60809 474 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 P4HA1P13674 534 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 HGFP14210 728 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 WT1P19544 449 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-209ENST00000472116 HNRNPA2B1P22626 353 aaKnown RBP10.6□□□□□ -0.71
CDHR3-209ENST00000472116 SLC6A4P31645 630 aa10.6□□□□□ -0.71
CDHR3-209ENST00000472116 CSKP41240 450 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms