RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 TMEM51Q9NW97 253 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 PLK2Q9NYY3 685 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ALG6Q9Y672 507 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 AGLP35573 1532 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 TMEM150BA6NC51 233 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CYP11B1P15538 503 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 COMTP21964 271 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ABL2P42684 1182 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 SERPINB8P50452 374 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 HNRNPH2P55795 449 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 ILF3Q12906 894 aaKnown RBP eCLIP8.74□□□□□ -1.01
CD47-204ENST00000471694 PCBP1Q15365 356 aaKnown RBP eCLIP8.74□□□□□ -1.01
CD47-204ENST00000471694 CARTPTQ16568 116 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 BROXQ5VW32 411 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 KLHL24Q6TFL4 600 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 SERPINB12Q96P63 405 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 FAIM2Q9BWQ8 316 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 TRABDQ9H4I3 376 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 EXOSC4Q9NPD3 245 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 ARL15Q9NXU5 204 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 TAF6LQ9Y6J9 622 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 MEGF6O75095 1541 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 C8AP07357 584 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CTPS1P17812 591 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CSTF2P33240 577 aaKnown RBP eCLIP8.74□□□□□ -1.01
CD47-204ENST00000471694 CSHL1Q14406 222 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 MINDY4Q4G0A6 757 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ZNF563Q8TA94 476 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 NEK7Q8TDX7 302 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
CD47-204ENST00000471694 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 RASSF4Q9H2L5 321 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 TMEM245Q9H330 911 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 MARCOQ9UEW3 520 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 A0A096LPK6 155 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 TRPC5OSA6NMA1 111 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ENO1P06733 434 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 PSMC3P17980 439 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 RBMS1P29558 406 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 SH3BGRP55822 239 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 CAP1Q01518 475 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 LRRC14Q15048 493 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 SF1Q15637 639 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 ZC3H12AQ5D1E8 599 aaKnown RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 MOXD1Q6UVY6 613 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 CYGBQ8WWM9 190 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 C18orf25Q96B23 403 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 TIFAQ96CG3 184 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 PRRG3Q9BZD7 231 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 NKX2-4Q9H2Z4 354 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 ELL3Q9HB65 397 aaPredicted RBP8.74□□□□□ -1.01
CD47-204ENST00000471694 VAV3Q9UKW4 847 aa8.74□□□□□ -1.01
CD47-204ENST00000471694 SDR42E2A6NKP2 422 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TMEM114B3SHH9 223 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 FOXN1O15353 648 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 KLHL18O94889 574 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 NFKB1P19838 968 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ALDH4A1P30038 563 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 BRCC3P46736 316 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 MAPK10P53779 464 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ARHGAP17Q68EM7 881 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 EMC1Q8N766 993 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 Q8N9G6 341 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 CCDC126Q96EE4 140 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 CNDP1Q96KN2 507 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 WWP1Q9H0M0 922 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SRRDQ9UH36 339 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 PADI3Q9ULW8 664 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ASF1AQ9Y294 204 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ARVCFO00192 962 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TLR5O60602 858 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TPH1P17752 444 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TCN1P20061 433 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 TRIM60Q495X7 471 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZNF518BQ9C0D4 1074 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 PSMC3IPQ9P2W1 217 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 RAD54BQ9Y620 910 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZNF780BQ9Y6R6 833 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZC3H13Q5T200 1668 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 A8MU76 341 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 B4DGG1 531 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZBTB39O15060 712 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 MATN4O95460 622 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SERPINB3P29508 390 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 CCND3P30281 292 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 HSPA14Q0VDF9 509 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 MRPL28Q13084 256 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 LRRC8BQ6P9F7 803 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 CNPY4Q8N129 248 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZNF296Q8WUU4 475 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 KLK6Q92876 244 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 FAM198AQ9UFP1 575 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 H3BNH8 94 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ZNF682O95780 498 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SNRPAP09012 282 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms