RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 MAGEA4P43358 317 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 ARL4CP56559 192 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 SLC10A2Q12908 348 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-208ENST00000471322 KRT71Q3SY84 523 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 TTMPQ5BVD1 217 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 C6orf118Q5T5N4 469 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 MSANTD2Q6P1R3 559 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 POTEHQ6S545 545 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 TMC8Q8IU68 726 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 RNF135Q8IUD6 432 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 CPT1BQ92523 772 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 EXOC4Q96A65 974 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 OLA1Q9NTK5 396 aaKnown RBP17.98■□□□□ 0.47
HSPG2-208ENST00000471322 OR12D3Q9UGF7 316 aa17.98■□□□□ 0.47
HSPG2-208ENST00000471322 DENND4AQ7Z401 1863 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 DLL1O00548 723 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 ALOX15BO15296 676 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 CHADO15335 359 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 STXBP5Q5T5C0 1151 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 HEATR6Q6AI08 1181 aaKnown RBP17.97■□□□□ 0.47
HSPG2-208ENST00000471322 NPAS3Q8IXF0 933 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 LRRC3Q9BY71 257 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 KLC2Q9H0B6 622 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
HSPG2-208ENST00000471322 NMUR1Q9HB89 426 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 TLR8Q9NR97 1041 aaKnown RBP17.97■□□□□ 0.47
HSPG2-208ENST00000471322 TMPRSS4Q9NRS4 437 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 ETNK2Q9NVF9 386 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 MUTYHQ9UIF7 546 aa17.97■□□□□ 0.47
HSPG2-208ENST00000471322 DOCK8Q8NF50 2099 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 A6NNZ2 444 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 ABHD2P08910 425 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 ERCC2P18074 760 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 MX2P20592 715 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 GABRR2P28476 465 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 SERPINB6P35237 376 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 TERF2Q15554 542 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 TEAD2Q15562 447 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 HIF1AQ16665 826 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 TUBB8Q3ZCM7 444 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 PRSS36Q5K4E3 855 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 GAREM2Q75VX8 874 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 ITIH5Q86UX2 942 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 FBXO32Q969P5 355 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 CENPHQ9H3R5 247 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 SAYSD1Q9NPB0 183 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 ANLNQ9NQW6 1124 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 PSD3Q9NYI0 1048 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 NINJ2Q9NZG7 142 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 CDH7Q9ULB5 785 aa17.96■□□□□ 0.47
HSPG2-208ENST00000471322 PTPRDP23468 1912 aa17.96■□□□□ 0.46
HSPG2-208ENST00000471322 MYO10Q9HD67 2058 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 FAM72CH0Y354 149 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 MOSPD3O75425 235 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 LAMP2P13473 410 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 HMGA1P17096 107 aaKnown RBP17.95■□□□□ 0.46
HSPG2-208ENST00000471322 BASP1P80723 227 aaKnown RBP17.95■□□□□ 0.46
HSPG2-208ENST00000471322 CBLBQ13191 982 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 KYNUQ16719 465 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 FAM72AQ5TYM5 149 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 FAM72DQ6L9T8 149 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 FAM72BQ86X60 149 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 PDIK1LQ8N165 341 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 SHKBP1Q8TBC3 707 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 HTR3CQ8WXA8 447 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 PGM2Q96G03 612 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 ZSWIM3Q96MP5 696 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 ATXN3LQ9H3M9 355 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 GMIPQ9P107 970 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 XPO7Q9UIA9 1087 aaKnown RBP17.95■□□□□ 0.46
HSPG2-208ENST00000471322 TLR6Q9Y2C9 796 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 ASB3Q9Y575 518 aa17.95■□□□□ 0.46
HSPG2-208ENST00000471322 I6L893 689 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 TNFRSF10AO00220 468 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 MFSD11O43934 449 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 TCEA3O75764 348 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 ACSL3O95573 720 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 SHBGP04278 402 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 IVLP07476 585 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 MAGEA6P43360 314 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 USP46P62068 366 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 CYP4F8P98187 520 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 MTA1Q13330 715 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 ACBD5Q5T8D3 534 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 C1orf74Q96LT6 269 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 PWWP2AQ96N64 755 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 CDK5RAP1Q96SZ6 601 aaKnown RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 RAB6BQ9NRW1 208 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 WDFY4Q6ZS81 3184 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 ZNF197O14709 1029 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 RASGRF2O14827 1237 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 MTSS1O43312 755 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 MAP3K6O95382 1288 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 EPHB2P29323 1055 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 EPHA5P54756 1037 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 NRG1Q02297 640 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 STAT4Q14765 748 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms