RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GRM6O15303 877 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 CA3P07451 260 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 TPSB2P20231 275 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 PSMB4P28070 264 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 CLCN4P51793 760 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 SHHQ15465 462 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 TPSAB1Q15661 275 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 MSS51Q4VC12 460 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 FAM109BQ6ICB4 259 aaPredicted RBP19.44■□□□□ 0.7
SMC4-209ENST00000468653 ARHGAP36Q6ZRI8 547 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 CROCCP2Q86T23 111 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 LRRC49Q8IUZ0 686 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 ANKMY2Q8IV38 441 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 HS6ST3Q8IZP7 471 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 MCUQ8NE86 351 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 AZIN2Q96A70 460 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 SERPINB12Q96P63 405 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 SMPD4Q9NXE4 827 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 BCCIPQ9P287 314 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMC4-209ENST00000468653 IGSF9Q9P2J2 1179 aa19.44■□□□□ 0.7
SMC4-209ENST00000468653 TLDC2A0PJX2 215 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 GOLGA6CA6NDK9 693 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 JCHAINP01591 159 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 GOLGA6DP0CG33 693 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 HDCP19113 662 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 PAPOLAP51003 745 aaKnown RBP19.43■□□□□ 0.7
SMC4-209ENST00000468653 SARNPP82979 210 aaKnown RBP19.43■□□□□ 0.7
SMC4-209ENST00000468653 ZBTB17Q13105 803 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 MTM1Q13496 603 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 TEX44Q53QW1 395 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 TXNDC8Q6A555 127 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 ITPRIPL1Q6GPH6 555 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 TIGD7Q6NT04 549 aaPredicted RBP19.43■□□□□ 0.7
SMC4-209ENST00000468653 RFWD3Q6PCD5 774 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 ARL14EPQ8N8R7 260 aaPredicted RBP19.43■□□□□ 0.7
SMC4-209ENST00000468653 PKNOX2Q96KN3 472 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 AGAP3Q96P47 875 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 CYP2S1Q96SQ9 504 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 CCDC77Q9BR77 488 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 VPS37BQ9H9H4 285 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 GOLGA6AQ9NYA3 693 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 RSPH14Q9UHP6 348 aa19.43■□□□□ 0.7
SMC4-209ENST00000468653 SMIM23A6NLE4 172 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 CCL16O15467 120 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 ZBTB24O43167 697 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 MAFKO60675 156 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 KLKB1P03952 638 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 ABHD2P08910 425 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 IRS1P35568 1242 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 MAGEA10P43363 369 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 CDK16Q00536 496 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 FAM133BQ5BKY9 247 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 KCTD16Q68DU8 428 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 GAREM2Q75VX8 874 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 CIR1Q86X95 450 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 FBXO36Q8NEA4 188 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 SLC22A17Q8WUG5 538 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 ATP6V1G3Q96LB4 118 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 TGS1Q96RS0 853 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 CORO1BQ9BR76 489 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 TMEM109Q9BVC6 243 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 LRRC4CQ9HCJ2 640 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 A0A087WUV0 522 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 ARHGAP42A6NI28 874 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 HMGB1P1B2RPK0 211 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 RASGRF2O14827 1237 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 MATN3O15232 486 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 MYL4P12829 197 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 CCNB1P14635 433 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 CDC25CP30307 473 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 OR1E1P30953 314 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 SLC6A4P31645 630 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 SMAD3P84022 425 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 CYP4F8P98187 520 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 RABGAP1LQ5R372 815 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 TMC8Q8IU68 726 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 PALM2Q8IXS6 379 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 PDCD7Q8N8D1 485 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 USP33Q8TEY7 942 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 MYEOVQ96EZ4 313 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 SAMD11Q96NU1 681 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 DDX50Q9BQ39 737 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 LRRC3Q9BY71 257 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 ROPN1BQ9BZX4 212 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 ATXN3LQ9H3M9 355 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 NOL6Q9H6R4 1146 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 ROPN1Q9HAT0 212 aaPredicted RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 EIF2B3Q9NR50 452 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 ASAH2Q9NR71 780 aa19.42■□□□□ 0.7
SMC4-209ENST00000468653 IPO11Q9UI26 975 aaKnown RBP19.42■□□□□ 0.7
SMC4-209ENST00000468653 RASA4BC9J798 803 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 RASA4O43374 803 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 AVILO75366 819 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 MAPKAPK2P49137 400 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 CAMK1Q14012 370 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 SKIDA1Q1XH10 827 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 CCDC38Q502W7 563 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 DNAJC21Q5F1R6 531 aaKnown RBP19.41■□□□□ 0.7
SMC4-209ENST00000468653 C6orf118Q5T5N4 469 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms