RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CSRP2Q16527 193 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 FUT11Q495W5 492 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 TTC39BQ5VTQ0 682 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-205ENST00000468338 MBLAC2Q68D91 279 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-205ENST00000468338 CHSY1Q86X52 802 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 CFAP52Q8N1V2 620 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 FRMD1Q8N878 549 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 KDM1BQ8NB78 822 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 SLC30A5Q8TAD4 765 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 MYO19Q96H55 970 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 C1orf74Q96LT6 269 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 TBCBQ99426 244 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 AGPAT1Q99943 283 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 CIPCQ9C0C6 399 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 MKRN2Q9H000 416 aaKnown RBP11.51□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 STIM2Q9P246 746 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 MBD1Q9UIS9 605 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-205ENST00000468338 HS3ST4Q9Y661 456 aa11.51□□□□□ -0.57
COL4A6-205ENST00000468338 CEP192Q8TEP8 1941 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 SYNJ2BP-COX16A0A087WUM0 186 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 A0A1B0GVM2 712 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 TCAF2A6NFQ2 919 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 GOLGA8SH3BPF8 625 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 RHOBTB1O94844 696 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ATP5BP06576 529 aaKnown RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 PRKCHP24723 683 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 CSKP41240 450 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 PRKCIP41743 596 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 SULT1E1P49888 294 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 COPAP53621 1224 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 FANCCQ00597 558 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ARID5AQ03989 594 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 SPEM2Q0P670 501 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 SLC12A1Q13621 1099 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 CDH18Q13634 790 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 STARD3Q14849 445 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ELF2Q15723 593 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ACBD5Q5T8D3 534 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 MON1BQ7L1V2 547 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 C14orf80Q86SX3 495 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 CCAR2Q8N163 923 aaKnown RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 C3orf20Q8ND61 904 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 CYB5D2Q8WUJ1 264 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 RLN3Q8WXF3 142 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 CENPIQ92674 756 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 COL26A1Q96A83 441 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ALG14Q96F25 216 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 MRGPRX3Q96LB0 322 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 C11orf70Q9BRQ4 267 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 TKTL2Q9H0I9 626 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 SEMA4GQ9NTN9 838 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 ADAM22Q9P0K1 906 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 COX16Q9P0S2 106 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 KIAA1522Q9P206 1035 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 PLA2G4CQ9UP65 541 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 INVSQ9Y283 1065 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 TNRC6BQ9UPQ9 1833 aaKnown RBP11.5□□□□□ -0.57
COL4A6-205ENST00000468338 NUMA1Q14980 2115 aa11.5□□□□□ -0.57
COL4A6-205ENST00000468338 DCHS1Q96JQ0 3298 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 IGLV3-10A0A075B6K4 115 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 FAM170AA1A519 330 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 BCLAF3A2AJT9 711 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 LRRC53A6NM62 1247 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 SIGLEC16A6NMB1 481 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 DRGXA6NNA5 263 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF217O75362 1048 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 SERPINC1P01008 464 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 IGLV3-19P01714 112 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ASLP04424 464 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CALB1P05937 261 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF806P0C7X5 589 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF16P17020 682 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 POLR2EP19388 210 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 MAPK1P28482 360 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 PTPN9P43378 593 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 NSFP46459 744 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 IRAK1P51617 712 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ATXN1P54253 815 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 DEUP1Q05D60 604 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 PLEKHG6Q3KR16 790 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CCDC14Q49A88 953 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 SERPINA13PQ6UXR4 307 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 TMPRSS6Q8IU80 811 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms