RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PLCB1Q9NQ66 1216 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 ASNSD1Q9NWL6 643 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 TOR4AQ9NXH8 423 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 PCDHGB2Q9Y5G2 931 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 H0Y8X5 98 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 HSF2BPO75031 334 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 RNASEH2AO75792 299 aaKnown RBP25.25■■□□□ 1.63
PTCH1-210ENST00000468211 CAPNS1P04632 268 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 GGCXP38435 758 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 PSMD8P48556 350 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 PTPN20Q4JDL3 420 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 EFHC1Q5JVL4 640 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 OTUD1Q5VV17 481 aaPredicted RBP25.25■■□□□ 1.63
PTCH1-210ENST00000468211 OR6B2Q6IFH4 312 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 MLKLQ8NB16 471 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 SLC6A18Q96N87 628 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 ADAMTS1Q9UHI8 967 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 SLC12A6Q9UHW9 1150 aa25.25■■□□□ 1.63
PTCH1-210ENST00000468211 FAM208BQ5VWN6 2430 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 ATXN1LP0C7T5 689 aaKnown RBP25.24■■□□□ 1.63
PTCH1-210ENST00000468211 ABCB4P21439 1286 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 CCR1P32246 355 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 CTSKP43235 329 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 METAP1P53582 386 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 PTK2Q05397 1052 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 NME3Q13232 169 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 RNF219Q5W0B1 726 aaPredicted RBP25.24■■□□□ 1.63
PTCH1-210ENST00000468211 C11orf57Q6ZUT1 292 aaPredicted RBP25.24■■□□□ 1.63
PTCH1-210ENST00000468211 RHBDD1Q8TEB9 315 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 RNF34Q969K3 372 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 ALG14Q96F25 216 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 OMDQ99983 421 aa25.24■■□□□ 1.63
PTCH1-210ENST00000468211 APOBEC2Q9Y235 224 aaKnown RBP25.24■■□□□ 1.63
PTCH1-210ENST00000468211 DSPP15924 2871 aaKnown RBP25.24■■□□□ 1.63
PTCH1-210ENST00000468211 A0A1B0GVM2 712 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 A0A1W2PPC4 97 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 TCAF2A6NFQ2 919 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 TAF4O00268 1085 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 WNT9AO14904 365 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 FLRT2O43155 660 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 WNT1P04628 370 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 SLC2A3P11169 496 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 PLK1P53350 603 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 IL9RQ01113 521 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 SLC12A1Q13621 1099 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 AUHQ13825 339 aaKnown RBP25.23■■□□□ 1.63
PTCH1-210ENST00000468211 MAN2A1Q16706 1144 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 HSP90AA4PQ58FG1 418 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 MIIPQ5JXC2 388 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 C14orf80Q86SX3 495 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 FRS2Q8WU20 508 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 VANGL2Q9ULK5 521 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 FZD4Q9ULV1 537 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 HS3ST4Q9Y661 456 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 ZFYVE26Q68DK2 2539 aa25.23■■□□□ 1.63
PTCH1-210ENST00000468211 FAM170AA1A519 330 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 PLK4O00444 970 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 DAB1O75553 588 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 TFE3P19532 575 aaPredicted RBP25.22■■□□□ 1.63
PTCH1-210ENST00000468211 RACK1P63244 317 aaKnown RBP25.22■■□□□ 1.63
PTCH1-210ENST00000468211 SLC6A3Q01959 620 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 DPCR1Q3MIW9 517 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 RABGAP1LQ5R372 815 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 SLC26A9Q7LBE3 791 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 FAM71AQ8IYT1 594 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 OR2T34Q8NGX1 318 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 RPRD1AQ96P16 312 aaPredicted RBP25.22■■□□□ 1.63
PTCH1-210ENST00000468211 CLSTN2Q9H4D0 955 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 ANLNQ9NQW6 1124 aa25.22■■□□□ 1.63
PTCH1-210ENST00000468211 ANKRD11Q6UB99 2663 aaPredicted RBP25.21■■□□□ 1.63
PTCH1-210ENST00000468211 LRRC72A6NJI9 287 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 I6L893 689 aaPredicted RBP25.21■■□□□ 1.63
PTCH1-210ENST00000468211 PAGE1O75459 146 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 IL1BP01584 269 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 GOT1P17174 413 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 C5AR1P21730 350 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 DRD3P35462 400 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 KRT9P35527 623 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 TPD52L1Q16890 204 aaPredicted RBP25.21■■□□□ 1.63
PTCH1-210ENST00000468211 PRAMEF14Q5SWL7 426 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 TTC39BQ5VTQ0 682 aaPredicted RBP25.21■■□□□ 1.63
PTCH1-210ENST00000468211 ADAT2Q7Z6V5 191 aaKnown RBP25.21■■□□□ 1.63
PTCH1-210ENST00000468211 NOX5Q96PH1 765 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 FEM1AQ9BSK4 669 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 NDST4Q9H3R1 872 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 PIGVQ9NUD9 493 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 OR51B4Q9Y5P0 310 aa25.21■■□□□ 1.63
PTCH1-210ENST00000468211 M0QYT0 321 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 VILLO15195 856 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 ADH1BP00325 375 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 NOS2P35228 1153 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 ADPRHP54922 357 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 SCAPQ12770 1279 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 KCNMA1Q12791 1236 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 SFSWAPQ12872 951 aaKnown RBP25.2■■□□□ 1.62
PTCH1-210ENST00000468211 ELAVL3Q14576 367 aaKnown RBP25.2■■□□□ 1.62
PTCH1-210ENST00000468211 VWA3BQ502W6 1294 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 CCNI2Q6ZMN8 369 aaPredicted RBP25.2■■□□□ 1.62
PTCH1-210ENST00000468211 SND1Q7KZF4 910 aaKnown RBP eCLIP25.2■■□□□ 1.62
PTCH1-210ENST00000468211 ZNF397Q8NF99 534 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms