RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
VPS26A-204ENST00000467852 B3GALNT2Q8NCR0 500 aa12.13□□□□□ -0.47
VPS26A-204ENST00000467852 ZNF548Q8NEK5 533 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-204ENST00000467852 MRPL45Q9BRJ2 306 aaKnown RBP12.13□□□□□ -0.47
VPS26A-204ENST00000467852 UNKQ9C0B0 810 aaKnown RBP12.13□□□□□ -0.47
VPS26A-204ENST00000467852 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
VPS26A-204ENST00000467852 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
VPS26A-204ENST00000467852 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
VPS26A-204ENST00000467852 TARSL2A2RTX5 802 aaKnown RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 TISP43B9A030 160 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 TPP1O14773 563 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 CASC3O15234 703 aaKnown RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 HMBSP08397 361 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 DEFB133Q30KQ1 61 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 NUGGCQ68CJ6 796 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 KCNK18Q7Z418 384 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 MCEMP1Q8IX19 187 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 DIS3L2Q8IYB7 885 aaKnown RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 NKD1Q969G9 470 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 KCNK17Q96T54 332 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 B3GNT4Q9C0J1 378 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 DPEP3Q9H4B8 488 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 CAAP1Q9H8G2 361 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 ERRFI1Q9UJM3 462 aaPredicted RBP12.12□□□□□ -0.47
VPS26A-204ENST00000467852 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
VPS26A-204ENST00000467852 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 A8MXQ7 604 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 C9orf172C9J069 976 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 D6RAR5 112 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 AQP9O43315 295 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 TACC1O75410 805 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 LIFP15018 202 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 NR1D1P20393 614 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 HOXD9P28356 352 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 WNT7BP56706 349 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 C9orf64Q5T6V5 341 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 ASB18Q6ZVZ8 466 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 KIAA0907Q7Z7F0 614 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 BRSK2Q8IWQ3 736 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPS26A-204ENST00000467852 TMEM145Q8NBT3 493 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 KCNB2Q92953 911 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 C5orf34Q96MH7 638 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 CMKLR1Q99788 373 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 MYOCQ99972 504 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 FAM213AQ9BRX8 229 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
VPS26A-204ENST00000467852 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 AGRPO00253 132 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 SLC31A1O15431 190 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 SLC7A4O43246 635 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 PLRG1O43660 514 aaKnown RBP12.1□□□□□ -0.47
VPS26A-204ENST00000467852 AP1G2O75843 785 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 FAM13AO94988 1023 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 IL1BP01584 269 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 RALAP11233 206 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 ETV5P41161 510 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 GTF2BQ00403 316 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
VPS26A-204ENST00000467852 DEFB109BQ30KR1 87 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 PPP1R26Q5T8A7 1209 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-204ENST00000467852 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 PTPRN2Q92932 1015 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 FAM84AQ96KN4 292 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 CDK5RAP1Q96SZ6 601 aaKnown RBP12.1□□□□□ -0.47
VPS26A-204ENST00000467852 FAM129BQ96TA1 746 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 BOCQ9BWV1 1114 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 CDH19Q9H159 772 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-204ENST00000467852 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 PADI4Q9UM07 663 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
VPS26A-204ENST00000467852 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
VPS26A-204ENST00000467852 EDDM13A0A1B0GTR0 161 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 A0A1W2PQH9 124 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 NKX2-8O15522 239 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 CDC45O75419 566 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 PRPF6O94906 941 aaKnown RBP12.09□□□□□ -0.47
VPS26A-204ENST00000467852 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms