RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 LRIG1Q96JA1 1093 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 FAM129BQ96TA1 746 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 THAP9Q9H5L6 903 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 EBF2Q9HAK2 575 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 CYTH4Q9UIA0 394 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 RAXQ9Y2V3 346 aa17.83■□□□□ 0.44
TRIM56-203ENST00000467847 COL5A1P20908 1838 aaPredicted RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 URB1O60287 2271 aaKnown RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 KNTC1P50748 2209 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 A0A1B0GTQ1 180 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 FAM149AA5PLN7 773 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 IGLV3-25P01717 112 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 WNT1P04628 370 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 GOT1P17174 413 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 C5AR1P21730 350 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 GNA15P30679 374 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 NNMTP40261 264 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 NUMBP49757 651 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 STK19P49842 368 aaPredicted RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 CCR5P51681 352 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 BECN1Q14457 450 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 KCNJ12Q14500 433 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 PRAMEF14Q5SWL7 426 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 OR14C36Q8NHC7 312 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 ELF4Q99607 663 aaPredicted RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 SRRTQ9BXP5 876 aaKnown RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 FAM204AQ9H8W3 233 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.82■□□□□ 0.442e-7■■■■□ 20.7
TRIM56-203ENST00000467847 SLC12A6Q9UHW9 1150 aa17.82■□□□□ 0.44
TRIM56-203ENST00000467847 FLNBO75369 2602 aaKnown RBP17.82■□□□□ 0.44
TRIM56-203ENST00000467847 KCNU1A8MYU2 1149 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 IL1BP01584 269 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 PDGFRAP16234 1089 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 ABCB4P21439 1286 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 MZF1P28698 734 aaPredicted RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 CD38P28907 300 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 ADPRHP54922 357 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 PITX1P78337 314 aaPredicted RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 PDCLQ13371 301 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 SLC12A1Q13621 1099 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 ELAVL3Q14576 367 aaKnown RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 TAF5Q15542 800 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 SMAD1Q15797 465 aaKnown RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 RABGAP1LQ5R372 815 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 CIR1Q86X95 450 aaPredicted RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 GATAD2AQ86YP4 633 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
TRIM56-203ENST00000467847 PTPRN2Q92932 1015 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 RNF34Q969K3 372 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 SERAC1Q96JX3 654 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 ACP6Q9NPH0 428 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 DKK4Q9UBT3 224 aa17.81■□□□□ 0.44
TRIM56-203ENST00000467847 SYNJ2BP-COX16A0A087WUM0 186 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 TRABD2BA6NFA1 517 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 SLC2A3P11169 496 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 VAV1P15498 845 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 CDK17Q00537 523 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 SULT2A1Q06520 285 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 CYP4F3Q08477 520 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 TTC39BQ5VTQ0 682 aaPredicted RBP17.8■□□□□ 0.44
TRIM56-203ENST00000467847 DHRS13Q6UX07 377 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 ENOSF1Q7L5Y1 443 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 PRMT1Q99873 361 aaKnown RBP17.8■□□□□ 0.44
TRIM56-203ENST00000467847 CRACR2AQ9BSW2 395 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 GDF3Q9NR23 364 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 DDIT4Q9NX09 232 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 COX16Q9P0S2 106 aa17.8■□□□□ 0.44
TRIM56-203ENST00000467847 TPX2Q9ULW0 747 aaKnown RBP17.8■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3DA0A087WVF3 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3IA0A087WXS9 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3EA0A087X179 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3KA0A087X1G2 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 A0A1B0GVM2 712 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 A0A1W2PR77 199 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3FA6NER0 549 aaPredicted RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TCAF2A6NFQ2 919 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 C10orf142B7Z368 130 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3LB9A6J9 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 WNT9AO14904 365 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 FGFR1OPO95684 399 aaKnown RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 ITGAVP06756 1048 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3HP0C7X1 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 CCR1P32246 355 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 USP8P40818 1118 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 OXCT1P55809 520 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 CAMK2BQ13554 666 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 SLC45A4Q5BKX6 768 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3GQ6DHY5 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3CQ6IPX1 549 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 GJB7Q6PEY0 223 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TRIM65Q6PJ69 517 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 TBC1D3Q8IZP1 549 aaPredicted RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 PDCD7Q8N8D1 485 aaKnown RBP17.79■□□□□ 0.44
TRIM56-203ENST00000467847 FAM81BQ96LP2 452 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 SPAG5Q96R06 1193 aa17.79■□□□□ 0.44
TRIM56-203ENST00000467847 ENC1O14682 589 aa17.78■□□□□ 0.44
TRIM56-203ENST00000467847 YKT6O15498 198 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms