RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DRGXA6NNA5 263 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PDE2AO00408 941 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 GFRA2O00451 464 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 DCLK1O15075 740 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TJP3O95049 919 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 HTR7P34969 479 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 FCHO2Q0JRZ9 810 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 GRM2Q14416 872 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RBBP5Q15291 538 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 C5orf22Q49AR2 442 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RABGAP1LQ5R372 815 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NCBP2-AS2Q69YL0 99 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PTCRAQ6ISU1 281 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 BBS12Q6ZW61 710 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NLRP14Q86W24 1093 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 MFSD6LQ8IWD5 586 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 OSCP1Q8WVF1 389 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 ELSPBP1Q96BH3 223 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TMA16Q96EY4 203 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RPGRIP1Q96KN7 1286 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PHF7Q9BWX1 381 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 CATSPERBQ9H7T0 1116 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 DUS2Q9NX74 493 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PLK2Q9NYY3 685 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 STIM2Q9P246 746 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NR2E1Q9Y466 385 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NUMBLQ9Y6R0 609 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TICRRQ7Z2Z1 1910 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TYW5A2RUC4 315 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 SLC9A3R1O14745 358 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 APOL1O14791 398 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 FGF10O15520 208 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 IL9P15248 144 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PSMC3P17980 439 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RPS6KA3P51812 740 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 EML3Q32P44 896 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NPNTQ6UXI9 565 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 MTSS1LQ765P7 747 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TMEM25Q86YD3 366 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NPWQ8N729 165 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 DRAXINQ8NBI3 349 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NETO2Q8NC67 525 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 DDI1Q8WTU0 396 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 E2F7Q96AV8 911 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 OTUB2Q96DC9 234 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 FAM118BQ9BPY3 351 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 AP1M1Q9BXS5 423 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 SPATS2LQ9NUQ6 558 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TMEM248Q9NWD8 314 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF212Q9UDV6 495 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 HEY1Q9Y5J3 304 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TCF20Q9UGU0 1960 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 COL4A3Q01955 1670 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 A0A1B0GVM2 712 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TCAF2A6NFQ2 919 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 APOC4-APOC2K7ER74 178 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 MFSD11O43934 449 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TBL1XO60907 577 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 APOC2P02655 101 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PECAM1P16284 738 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RHOQP17081 205 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 HOXD9P28356 352 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 PAFAH1B1P43034 410 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 IFNAR2P48551 515 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 GBE1Q04446 702 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 HTR4Q13639 388 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TFDP2Q14188 446 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 SIX1Q15475 284 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 LY6G5CQ5SRR4 150 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 FYB2Q5VWT5 728 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 TP53INP2Q8IXH6 220 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 CCDC33Q8N5R6 958 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RTL3Q8N8U3 475 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 HJURPQ8NCD3 748 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF483Q8TF39 744 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RSAD2Q8WXG1 361 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 IRF7Q92985 503 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 NAP1L3Q99457 506 aaPredicted RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 EBF3Q9H4W6 596 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 SLC24A3Q9HC58 644 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 SPHK2Q9NRA0 654 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 RNF14Q9UBS8 474 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 BLOC1S6Q9UL45 172 aa7.05□□□□□ -1.28
SCAF4-204ENST00000467731 R3HDM2Q9Y2K5 976 aaKnown RBP7.05□□□□□ -1.28
SCAF4-204ENST00000467731 OTOL1A6NHN0 477 aaPredicted RBP7.04□□□□□ -1.28
SCAF4-204ENST00000467731 ANHXE9PGG2 379 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 NEDD8-MDP1E9PL57 170 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 KRIT1O00522 736 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 CLDN11O75508 207 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 ECI2O75521 394 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 IVLP07476 585 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 ZFXP17010 805 aaPredicted RBP7.04□□□□□ -1.28
SCAF4-204ENST00000467731 OR1E1P30953 314 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 NUMBP49757 651 aa7.04□□□□□ -1.28
SCAF4-204ENST00000467731 CDH4P55283 916 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms