RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GALNT3Q14435 633 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 TRIM60Q495X7 471 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 COBLL1Q53SF7 1204 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 C10orf76Q5T2E6 689 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 C9orf57Q5W0N0 161 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 C8orf82Q6P1X6 216 aaPredicted RBP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 TMEM88Q6PEY1 159 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 Q6ZTK2 550 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC25A41Q8N5S1 370 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 WFIKKN2Q8TEU8 576 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 IPO4Q8TEX9 1081 aaKnown RBP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 ZNF419Q96HQ0 510 aaPredicted RBP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 RIPOR3Q96MK2 946 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 EPS8L2Q9H6S3 715 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 RAB21Q9UL25 225 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 TRPC5Q9UL62 973 aaPredicted RBP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 PKP3Q9Y446 797 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 COPG1Q9Y678 874 aaKnown RBP3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 SCN5AQ14524 2016 aa3.31□□□□□ -1.88
GTF3C3-209ENST00000466862 PAPSS2O95340 614 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 PCYT1AP49585 367 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 PDLIM4P50479 330 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 RRP1P56182 461 aaKnown RBP3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 GPR18Q14330 331 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 HNF4GQ14541 408 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 NFATC4Q14934 902 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ALG10Q5BKT4 473 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ARL13AQ5H913 290 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ALG10BQ5I7T1 473 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 C9orf50Q5SZB4 431 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ANKRD40Q6AI12 368 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 FBXO38Q6PIJ6 1188 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC16A12Q6ZSM3 486 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 Q6ZSV7 163 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 DPP9Q86TI2 863 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 ANKRD13AQ8IZ07 590 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 CADM3Q8N126 398 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 NEXN-AS1Q8NBZ9 246 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 LMO3Q8TAP4 145 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 BICD2Q8TD16 824 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 CLEC4CQ8WTT0 213 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 MECRQ9BV79 373 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 TP63Q9H3D4 680 aaPredicted RBP3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 KLHL31Q9H511 634 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 TXLNGQ9NUQ3 528 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 DTX4Q9Y2E6 619 aa3.3□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A18PA6NE21 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A16PA6NEW6 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 OR6C75A6NL08 312 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A9PA6NNJ1 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A5PA8MXJ8 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 HNRNPDLO14979 420 aaKnown RBP3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 PLA2G6O60733 806 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A15PP0C7V4 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM90A14PP0C7W9 464 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 TNFSF8P32971 234 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 GRK5P34947 590 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC16A2P36021 539 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 STAT1P42224 750 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 ART1P52961 327 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 ZP1P60852 638 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 DCAF12L2Q5VW00 463 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 IZUMO3Q5VZ72 239 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 TMEM71Q6P5X7 295 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 PRSS57Q6UWY2 283 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 GSG1LQ6UXU4 331 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 TTC30AQ86WT1 665 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 PJA1Q8NG27 643 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 ZNF566Q969W8 418 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 KIAA1191Q96A73 305 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 REXO5Q96IC2 774 aaKnown RBP3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 NPAS1Q99742 590 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 SEZ6LQ9BYH1 1024 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 B3GNT4Q9C0J1 378 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 RMI1Q9H9A7 625 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 HIF1ANQ9NWT6 349 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 FZD10Q9ULW2 581 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 NFU1Q9UMS0 254 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 MAGED2Q9UNF1 606 aaPredicted RBP3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 TNFSF13BQ9Y275 285 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 PCDHGB2Q9Y5G2 931 aa3.29□□□□□ -1.88
GTF3C3-209ENST00000466862 ANO9A1A5B4 782 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 MBD3L5A6NJ08 208 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SRRM3A6NNA2 597 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SMTNL1A8MU46 457 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 KIF28PB7ZC32 967 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SOX30O94993 753 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 PLGP00747 810 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 CYP1A2P05177 515 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 MYL3P08590 195 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 GNLYP22749 145 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 HOXD3P31249 432 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 ALDH18A1P54886 795 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 RBM6P78332 1123 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 RPL36AP83881 106 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SF3A3Q12874 501 aaKnown RBP eCLIP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 LONRF1Q17RB8 773 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms