RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GRAP2O75791 330 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 PDGFRAP16234 1089 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 CCR1P32246 355 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 NNMTP40261 264 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 CCT8P50990 548 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 RACK1P63244 317 aaKnown RBP19.76■□□□□ 0.75
COL9A3-206ENST00000466532 PTK2Q05397 1052 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 KCNT1Q5JUK3 1230 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 FAM183BPQ6ZVS7 135 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 C1orf131Q8NDD1 294 aaKnown RBP19.76■□□□□ 0.75
COL9A3-206ENST00000466532 OR2T34Q8NGX1 318 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 PTPRN2Q92932 1015 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 SLC6A18Q96N87 628 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 NOX5Q96PH1 765 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 AJAP1Q9UKB5 411 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-206ENST00000466532 COL5A1P20908 1838 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-206ENST00000466532 H0Y8X5 98 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 ADH1BP00325 375 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 ATXN1LP0C7T5 689 aaKnown RBP19.75■□□□□ 0.75
COL9A3-206ENST00000466532 MZF1P28698 734 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-206ENST00000466532 CTSKP43235 329 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 C21orf59P57076 290 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 SULT2A1Q06520 285 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 TPD52L1Q16890 204 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-206ENST00000466532 OR6B2Q6IFH4 312 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 FBXL22Q6P050 247 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 C11orf57Q6ZUT1 292 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-206ENST00000466532 SND1Q7KZF4 910 aaKnown RBP eCLIP19.75■□□□□ 0.755e-20■■■□□ 16.5
COL9A3-206ENST00000466532 AADATQ8N5Z0 425 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 ACE2Q9BYF1 805 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-206ENST00000466532 TOR4AQ9NXH8 423 aa19.75■□□□□ 0.75
COL9A3-206ENST00000466532 ADAMTS20P59510 1910 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 GOLGA8CPA6NN73 597 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 VILLO15195 856 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 IL1BP01584 269 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 ERBB2P04626 1255 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 C5AR1P21730 350 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 KRT9P35527 623 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 PLK1P53350 603 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 OXCT1P55809 520 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 IL9RQ01113 521 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 CENPCQ03188 943 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 SCAPQ12770 1279 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 NME3Q13232 169 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 ELAVL3Q14576 367 aaKnown RBP19.74■□□□□ 0.75
COL9A3-206ENST00000466532 CXorf57Q6NSI4 855 aaKnown RBP19.74■□□□□ 0.75
COL9A3-206ENST00000466532 LRSAM1Q6UWE0 723 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 OLFML1Q6UWY5 402 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 CCNI2Q6ZMN8 369 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-206ENST00000466532 MLKLQ8NB16 471 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 RPRD1AQ96P16 312 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-206ENST00000466532 SYNCQ9H7C4 482 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 EBF2Q9HAK2 575 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 SIX2Q9NPC8 291 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 DNAJC12Q9UKB3 198 aa19.74■□□□□ 0.75
COL9A3-206ENST00000466532 PKD1L2Q7Z442 2459 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 PCDHGA12O60330 932 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 DAB1O75553 588 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 VAV1P15498 845 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 GOT1P17174 413 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 GRK6P43250 576 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 ADPRHP54922 357 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 SNX16P57768 344 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 SLC6A3Q01959 620 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 KCNJ12Q14500 433 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 MAN2A1Q16706 1144 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 PTPN20Q4JDL3 420 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 SLC47A2Q86VL8 602 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 OR14C36Q8NHC7 312 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 SKA1Q96BD8 255 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 PPP1R9BQ96SB3 815 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 AASDHPPTQ9NRN7 309 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 SLC25A13Q9UJS0 675 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 VANGL2Q9ULK5 521 aa19.73■□□□□ 0.75
COL9A3-206ENST00000466532 GOLGA4Q13439 2230 aaKnown RBP19.72■□□□□ 0.75
COL9A3-206ENST00000466532 FOXN3O00409 490 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-206ENST00000466532 DFNA5O60443 496 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 CAPNS1P04632 268 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 PNMA6AP0CW24 399 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-206ENST00000466532 CLCN1P35523 988 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 GGCXP38435 758 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 IRAK1P51617 712 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 CCR5P51681 352 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 MTA1Q13330 715 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 AUHQ13825 339 aaKnown RBP19.72■□□□□ 0.75
COL9A3-206ENST00000466532 SMYD5Q6GMV2 418 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-206ENST00000466532 SLC26A9Q7LBE3 791 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 PROSER1Q86XN7 944 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 FRS2Q8WU20 508 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 SPAG5Q96R06 1193 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 PLCB1Q9NQ66 1216 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 HS3ST4Q9Y661 456 aa19.72■□□□□ 0.75
COL9A3-206ENST00000466532 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-206ENST00000466532 A0A1B0GTQ1 180 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 M0QYT0 321 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 TAF4O00268 1085 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 TNFSF14O43557 240 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 DKK1O94907 266 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms