RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 MSANTD2Q6P1R3 559 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 VITQ6UXI7 678 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 FAM183BPQ6ZVS7 135 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 TRPM8Q7Z2W7 1104 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 KATNAL2Q8IYT4 538 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 CPA6Q8N4T0 437 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SH2D3CQ8N5H7 860 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 RSAD2Q8WXG1 361 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 EDEM1Q92611 657 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 ATP2A3Q93084 1043 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 PLD4Q96BZ4 506 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 OTUB2Q96DC9 234 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 MSANTD3Q96H12 275 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SHDQ96IW2 340 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 C11orf70Q9BRQ4 267 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SMG9Q9H0W8 520 aaKnown RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 SMOC2Q9H3U7 446 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC2A4RGQ9NR83 387 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 TXLNGQ9NUQ3 528 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 DUS2Q9NX74 493 aaKnown RBP10.32□□□□□ -0.76
PMF1-204ENST00000466489 CFAP97Q9P2B7 532 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC24A2Q9UI40 661 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 CYTH4Q9UIA0 394 aa10.32□□□□□ -0.76
PMF1-204ENST00000466489 SLC12A8A0AV02 714 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 GOLGA8SH3BPF8 625 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 DAB1O75553 588 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 SPAG6O75602 509 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 DCTN3O75935 186 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ADH1CP00326 375 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 APOEP02649 317 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 UNGP13051 313 aaPredicted RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 DRD4P21917 467 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 NOS2P35228 1153 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 PTPN7P35236 360 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 SCTRP47872 440 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ATP11AP98196 1134 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 GRM2Q14416 872 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 DNAJC24Q6P3W2 148 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 CYB5D1Q6P9G0 228 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 OLFML1Q6UWY5 402 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ANKS1BQ7Z6G8 1248 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 XYLT1Q86Y38 959 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 UNC45BQ8IWX7 931 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 FBXO25Q8TCJ0 367 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 CLEC4CQ8WTT0 213 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 OSCP1Q8WVF1 389 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 NDRG1Q92597 394 aaKnown RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 RNF34Q969K3 372 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ZNF653Q96CK0 615 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 MAGEB18Q96M61 343 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ZNF317Q96PQ6 595 aaPredicted RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 DDX50Q9BQ39 737 aaKnown RBP10.31□□□□□ -0.76
PMF1-204ENST00000466489 DPH5Q9H2P9 285 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 MFSD1Q9H3U5 465 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 OSGEPQ9NPF4 335 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 TRPV5Q9NQA5 729 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 OSER1Q9NX31 292 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.31□□□□□ -0.76
PMF1-204ENST00000466489 WNT16Q9UBV4 365 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 ASIC3Q9UHC3 531 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 NUDT5Q9UKK9 219 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 SNX24Q9Y343 169 aa10.31□□□□□ -0.76
PMF1-204ENST00000466489 TYW5A2RUC4 315 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 ZSCAN5CA6NGD5 496 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 MGRN1O60291 552 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 PROSCO94903 275 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 TBX18O95935 607 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 F9P00740 461 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 HMBSP08397 361 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 KRT3P12035 628 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 GLULP15104 373 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 CHN1P15882 459 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 CCND1P24385 295 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SDC4P31431 198 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 CHKAP35790 457 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 MATKP42679 507 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SLC11A2P49281 568 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SEC24CP53992 1094 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 TBX4P57082 545 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 ZXDAP98168 799 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 RING1Q06587 406 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SIGLEC14Q08ET2 396 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 MORF4L2Q15014 288 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 TRIP4Q15650 581 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 ITPRIPL2Q3MIP1 535 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 WLSQ5T9L3 541 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 LGSNQ5TDP6 509 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 DCUN1D2Q6PH85 259 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 RGS9BPQ6ZS82 235 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 ARCQ7LC44 396 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 BHLHA9Q7RTU4 235 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 DEFB106AQ8N104 65 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms