RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 APOL1O14791 398 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 DAPK3O43293 454 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 APOC2P02655 101 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 FGGP02679 453 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 CISD3P0C7P0 127 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 SRFP11831 508 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 PECAM1P16284 738 aaPredicted RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 ZFXP17010 805 aaPredicted RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 TGM2P21980 687 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 GJA4P35212 333 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 OPRD1P41143 372 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 CETN2P41208 172 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 MESP2Q0VG99 397 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 LMAN2Q12907 356 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 SLC10A2Q12908 348 aaPredicted RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 TDGQ13569 410 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 ANO4Q32M45 955 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 IER5LQ5T953 404 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 NAIF1Q69YI7 327 aaPredicted RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 TMCO3Q6UWJ1 677 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 NPNTQ6UXI9 565 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 MFN1Q8IWA4 741 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 TP53INP2Q8IXH6 220 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 PHTF2Q8N3S3 785 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 NETO2Q8NC67 525 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 OLFM3Q96PB7 478 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 SLC2A11Q9BYW1 496 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 SMARCAL1Q9NZC9 954 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 DTLQ9NZJ0 730 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 DUSP12Q9UNI6 340 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 R3HDM2Q9Y2K5 976 aaKnown RBP11.44□□□□□ -0.58
VCP-204ENST00000466100 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 SHISA7A6NL88 538 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 TRIM24O15164 1050 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 TULP3O75386 442 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 TJP3O95049 919 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 RHOCP08134 193 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 HLA-FP30511 346 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 OR1E1P30953 314 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 CD70P32970 193 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 SERPINB6P35237 376 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 NDST2P52849 883 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 PLK1P53350 603 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 YBEYP58557 167 aaPredicted RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 DYNLT1P63172 113 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 GNA12Q03113 381 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 GALNT2Q10471 571 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 ZNF177Q13360 481 aaPredicted RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 CDH18Q13634 790 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 NOMO1Q15155 1222 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 ZNF783Q6ZMS7 281 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 LZTR1Q8N653 840 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 KIF18AQ8NI77 898 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 TTC8Q8TAM2 541 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 CELF6Q96J87 481 aaKnown RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 MAK16Q9BXY0 300 aaKnown RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 SLC39A8Q9C0K1 460 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 CD320Q9NPF0 282 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 DONSONQ9NYP3 566 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 SAE1Q9UBE0 346 aaPredicted RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 INTS6Q9UL03 887 aaKnown RBP11.43□□□□□ -0.58
VCP-204ENST00000466100 SLC27A6Q9Y2P4 619 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 RAD54BQ9Y620 910 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 ATG2BQ96BY7 2078 aa11.43□□□□□ -0.58
VCP-204ENST00000466100 CKAP5Q14008 2032 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 A0A0D9SEW6 157 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 RASA4BC9J798 803 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 H0Y626 953 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 RASA4O43374 803 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 RAMP2O60895 175 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 MAP3K6O95382 1288 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 MZF1P28698 734 aaPredicted RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 CTHP32929 405 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ACVRL1P37023 503 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 CSKP41240 450 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 SLC6A11P48066 632 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 SOX9P48436 509 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 NR2C2P49116 596 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 NR1H3Q13133 447 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 PLEKHG6Q3KR16 790 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 PARP15Q460N3 678 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 C1orf228Q6PIY5 440 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 TXNDC11Q6PKC3 985 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 RNF135Q8IUD6 432 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 NAT16Q8N8M0 369 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 PRELID2Q8N945 189 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 OR7D4Q8NG98 312 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 CSGALNACT1Q8TDX6 532 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ZNF592Q92610 1267 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ARHGEF2Q92974 986 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms