RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 SLC13A1Q9BZW2 595 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 FAM49AQ9H0Q0 323 aaPredicted RBP8.72□□□□□ -1.01
ACTB-208ENST00000464611 RNF208Q9H0X6 261 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 OSBPL2Q9H1P3 480 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 VCXQ9H320 206 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 VCX3BQ9H321 246 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 CASS4Q9NQ75 786 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 XPNPEP3Q9NQH7 507 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 PAK6Q9NQU5 681 aaPredicted RBP8.72□□□□□ -1.01
ACTB-208ENST00000464611 TAS2R1Q9NYW7 299 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 STX18Q9P2W9 335 aaKnown RBP8.72□□□□□ -1.01
ACTB-208ENST00000464611 PPARGC1AQ9UBK2 798 aaKnown RBP8.72□□□□□ -1.01
ACTB-208ENST00000464611 TRIM33Q9UPN9 1127 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 GIT1Q9Y2X7 761 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 L3MBTL1Q9Y468 752 aa8.72□□□□□ -1.01
ACTB-208ENST00000464611 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
ACTB-208ENST00000464611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 WDR27A2RRH5 827 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 B2RBV5 119 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 PIK3R2O00459 728 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ANXA9O76027 345 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 TM7SF2O76062 418 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 THP07101 528 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ITGA2BP08514 1039 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CSH1P0DML2 217 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CSH2P0DML3 217 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CPA3P15088 417 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ACAT1P24752 427 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 LMO2P25791 158 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CST5P28325 142 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 MAGEA12P43365 314 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SLC1A6P48664 564 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CXCR3P49682 368 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CLCN2P51788 898 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 TKTL1P51854 596 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 DAOAP59103 153 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 TPI1P60174 286 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 RPL26P61254 145 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 AP2B1P63010 937 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 XIAPP98170 497 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ADIGQ0VDE8 80 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 OVGP1Q12889 678 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SEMA3BQ13214 749 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ARSIQ5FYB1 569 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 BRMS1LQ5PSV4 323 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 UBXN11Q5T124 520 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 GJC2Q5T442 439 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 PDPK2PQ6A1A2 396 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 DENND5BQ6ZUT9 1274 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SETD3Q86TU7 594 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 FAM131BQ86XD5 332 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ARID3BQ8IVW6 561 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 SCUBE1Q8IWY4 988 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 TAB3Q8N5C8 712 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 PCSK9Q8NBP7 692 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 ARRDC4Q8NCT1 418 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ARNTL2Q8WYA1 636 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 JADE3Q92613 823 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 PGBD4Q96DM1 585 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SMARCD1Q96GM5 515 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 UROC1Q96N76 676 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 UNC93B1Q9H1C4 597 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 UPF3AQ9H1J1 476 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 DPEP3Q9H4B8 488 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 NXF3Q9H4D5 531 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 DENND2DQ9H6A0 471 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 PLAC1Q9HBJ0 212 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 MRM3Q9HC36 420 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 CSNK1G1Q9HCP0 422 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SMYD2Q9NRG4 433 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 ARL8BQ9NVJ2 186 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 NDE1Q9NXR1 346 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 KLHL8Q9P2G9 620 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 VTI1BQ9UEU0 232 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CORO1CQ9ULV4 474 aaPredicted RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 SSX2IPQ9Y2D8 614 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 HBS1LQ9Y450 684 aaKnown RBP8.71□□□□□ -1.02
ACTB-208ENST00000464611 IPPQ9Y573 584 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 CEP350Q5VT06 3117 aa8.71□□□□□ -1.02
ACTB-208ENST00000464611 SCN1AP35498 2009 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 HMX2A2RU54 273 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 PPEF2O14830 753 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 GPR182O15218 404 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 FGF10O15520 208 aaPredicted RBP8.7□□□□□ -1.02
ACTB-208ENST00000464611 ZNF623O75123 536 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 ADAMTS4O75173 837 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 PSMG1O95456 288 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 LTFP02788 710 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 CHRM1P11229 460 aaPredicted RBP8.7□□□□□ -1.02
ACTB-208ENST00000464611 RALBP11234 206 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 ERCC2P18074 760 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 CCNCP24863 283 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 MGAT1P26572 445 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 SERPINB5P36952 375 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 LIMK2P53671 638 aa8.7□□□□□ -1.02
ACTB-208ENST00000464611 AQP5P55064 265 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms