RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RFFLQ8WZ73 363 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 PTPRN2Q92932 1015 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 NT5C1BQ96P26 610 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 TRIM62Q9BVG3 475 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 SLCO3A1Q9UIG8 710 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
HMGN1-210ENST00000464078 SLC7A4O43246 635 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 BRD2P25440 801 aaKnown RBP17.86■□□□□ 0.45
HMGN1-210ENST00000464078 ITPKBP27987 946 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 DRD3P35462 400 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 VASPP50552 380 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-210ENST00000464078 PMS1P54277 932 aaKnown RBP17.86■□□□□ 0.45
HMGN1-210ENST00000464078 CLDN6P56747 220 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 PPP2CBP62714 309 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 PPP2CAP67775 309 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 OVGP1Q12889 678 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 TARDBPQ13148 414 aaKnown RBP eCLIP17.86■□□□□ 0.459e-9■■■□□ 17.5
HMGN1-210ENST00000464078 SLC12A1Q13621 1099 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 ZNF658Q5TYW1 1059 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-210ENST00000464078 LRRC69Q6ZNQ3 347 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 TAC4Q86UU9 113 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 CFAP52Q8N1V2 620 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 STK40Q8N2I9 435 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 OR14C36Q8NHC7 312 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 SPAG5Q96R06 1193 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 KDM4CQ9H3R0 1056 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 METTL14Q9HCE5 456 aaKnown RBP17.86■□□□□ 0.45
HMGN1-210ENST00000464078 DMTF1Q9Y222 760 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 PCDHB4Q9Y5E5 795 aa17.86■□□□□ 0.45
HMGN1-210ENST00000464078 RNF225M0QZC1 329 aaPredicted RBP17.85■□□□□ 0.45
HMGN1-210ENST00000464078 MAST4O15021 2626 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 RRP8O43159 456 aaKnown RBP17.85■□□□□ 0.45
HMGN1-210ENST00000464078 C1QL1O75973 258 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 APOEP02649 317 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 CKMT2P17540 419 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 SEMG2Q02383 582 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 GCNT1Q02742 428 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 SULT2A1Q06520 285 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 C19orf57Q0VDD7 668 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 PNOCQ13519 176 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 MEA1Q16626 185 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 ANKRD40Q6AI12 368 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 SPATS2Q86XZ4 545 aaKnown RBP17.85■□□□□ 0.45
HMGN1-210ENST00000464078 APCDD1Q8J025 514 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 BAP1Q92560 729 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 BTN2A3PQ96KV6 586 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 MIS12Q9H081 205 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 ARHGAP20Q9P2F6 1191 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 XPO7Q9UIA9 1087 aaKnown RBP17.85■□□□□ 0.45
HMGN1-210ENST00000464078 NAALADL1Q9UQQ1 740 aa17.85■□□□□ 0.45
HMGN1-210ENST00000464078 MAGEC1O60732 1142 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 MOCS2O96007 188 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-210ENST00000464078 IL1BP01584 269 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 IGLV3-25P01717 112 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 TACR2P21452 398 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 GPD2P43304 727 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 STK19P49842 368 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-210ENST00000464078 TTC39BQ5VTQ0 682 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-210ENST00000464078 TRIM69Q86WT6 500 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 CHSY1Q86X52 802 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 LGI2Q8N0V4 545 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 PPM1KQ8N3J5 372 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 DCBLD1Q8N8Z6 715 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 LMO3Q8TAP4 145 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 SPATA20Q8TB22 786 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 STK32AQ8WU08 396 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 FRS2Q8WU20 508 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 SLC39A7Q92504 469 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 KAT5Q92993 513 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 FAM149B1Q96BN6 582 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 RPL10LQ96L21 214 aaKnown RBP17.84■□□□□ 0.45
HMGN1-210ENST00000464078 GTPBP4Q9BZE4 634 aaKnown RBP17.84■□□□□ 0.45
HMGN1-210ENST00000464078 TJP2Q9UDY2 1190 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 CYTH4Q9UIA0 394 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 AK5Q9Y6K8 562 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 ATMQ13315 3056 aa17.84■□□□□ 0.45
HMGN1-210ENST00000464078 TBC1D3DA0A087WVF3 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3IA0A087WXS9 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3EA0A087X179 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3KA0A087X1G2 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TRIM49BA6NDI0 452 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3FA6NER0 549 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3LB9A6J9 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 P4HA2O15460 535 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 PLRG1O43660 514 aaKnown RBP17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3HP0C7X1 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 ACP1P24666 158 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 NNMTP40261 264 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 ACADSBP45954 432 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 PLK1P53350 603 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 BNIP3Q12983 259 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 PROX2Q3B8N5 592 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 SYPL2Q5VXT5 272 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 RAP1GAP2Q684P5 730 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3GQ6DHY5 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 TBC1D3CQ6IPX1 549 aa17.83■□□□□ 0.44
HMGN1-210ENST00000464078 DSG4Q86SJ6 1040 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms